Pairwise Alignments

Query, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 220 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  136 bits (343), Expect = 3e-37
 Identities = 74/214 (34%), Positives = 122/214 (57%), Gaps = 1/214 (0%)

Query: 1   MDLDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYV 60
           M+ D+  V Q  P L+ G  +T+  TA    +  V+GL+  I R+      I    +  V
Sbjct: 1   MEWDWEFVRQIMPTLIEGLKITILATALGSVVAAVIGLVFAILRMTAPTP-IARVTSFAV 59

Query: 61  AAIRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQT 120
             IRGTPLLVQL+ +F+ LP  GI LPA + GV+GLG++ G Y +E+ R  I+++ +GQ 
Sbjct: 60  EFIRGTPLLVQLYFIFYVLPDIGIRLPALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQW 119

Query: 121 MAAQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKII 180
            AA++  +T       ++LPQA+  MIP L N  IA+ K + L+S +T+ ++M++ + I 
Sbjct: 120 EAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKSIA 179

Query: 181 SVSYRSLEVYLAIAVVYFVLTGTMTLILRHFEQK 214
           + +YR +E    + V + +++      LR  E +
Sbjct: 180 NSNYRYIEPMTLVGVFFLIMSLISVFFLRWLEAR 213