Pairwise Alignments

Query, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 241 a.a., polar amino acid ABC transporter permease from Klebsiella michiganensis M5al

 Score =  146 bits (368), Expect = 4e-40
 Identities = 79/210 (37%), Positives = 125/210 (59%), Gaps = 3/210 (1%)

Query: 8   VWQGW--PDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRG 65
           +WQ +  P+ ++GA +T+ IT C+L  G VLGL++ + +  P R    G    Y+   RG
Sbjct: 6   MWQYFLSPEFVQGAWMTLLITLCSLLCGVVLGLVLALLQEAPFRAG-KGLAFFYLWLFRG 64

Query: 66  TPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQS 125
           TP+L Q+  ++  LP FG+   AF C VL L +  GAY++EI+R  +Q++  GQ  A  +
Sbjct: 65  TPVLFQIIFVYNVLPGFGLRFSAFTCAVLALSLNEGAYMAEILRSGLQAVKSGQRTAGMA 124

Query: 126 LGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYR 185
           LGMT G  MR+IVLPQA   ++PP+GN+ I+++K+SALVS++ + +++    +  S S+R
Sbjct: 125 LGMTSGQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLVANQTASASFR 184

Query: 186 SLEVYLAIAVVYFVLTGTMTLILRHFEQKL 215
             E   A  + Y +LT    +     E  L
Sbjct: 185 YFEALCAAGIYYLLLTSLFMVFQSWLESVL 214