Pairwise Alignments

Query, 502 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

Subject, 492 a.a., type VI secretion protein, EvpB/VC_A0108 family from Pseudomonas stutzeri RCH2

 Score =  359 bits (922), Expect = e-103
 Identities = 188/430 (43%), Positives = 267/430 (62%), Gaps = 9/430 (2%)

Query: 69  VQAIITEIDRKLSEQINQILHHEEFQQLEGAWRGLHYLVNNTETDEQLKIRVMCASKREV 128
           V  +I EID KLS+Q+++ILHH +FQ LE +WRGL  LV+ T   E +K+ ++ ASK+++
Sbjct: 65  VDRMIAEIDAKLSQQMDEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNASKQDL 124

Query: 129 ARSLKRHKGIGWDQSPLFKKIYEAEYGQFGGEPFGALIGDFHFDHSPPDVEMLGEMAKIA 188
               +    I   QS L+K IY AEYGQFGG+P GALI ++ FD S PDV+ +  +A +A
Sbjct: 125 LDDFEDSPEIV--QSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTMQYVASVA 182

Query: 189 AAAHCPFIAGASPTVMQMDSWQELSNPRDLTKIFQNTEHTAWRSLRDSEDARYIGLAMPR 248
           + +H PFIA A P    ++S+  L + +DL   F+  + T W+S R+ EDARY+GL +PR
Sbjct: 183 SMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTVPR 242

Query: 249 FLARLPYGARTNPVDEFEFEEETDSAAHNRYTWANSAYAMGVNINRSFKQYGWCTSIRGV 308
           FL R PY    NPV  F ++E   + +H  Y W N+AY     +  SF ++ WC +I G 
Sbjct: 243 FLLRNPYDPEDNPVKSFVYKENV-AGSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGP 301

Query: 309 ESGGAVENLPTHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIG 368
           +SGGAVE+LP H F +  G ++ K PTE+ +SDRRE ELA+ GF+ L  RK SD AAF  
Sbjct: 302 QSGGAVEDLPLHHFES-MGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFS 360

Query: 369 AQSLQLPAEYYDAD----ATANANLAARLPYLFACCRFAHYLKCIVRDKIGSFREREDME 424
           A S Q P  + +++    A  N  L  +LPYLF   R AHYLK + R++IG+++ER D+E
Sbjct: 361 ANSAQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLE 420

Query: 425 RWLNDWIMNYVDGSPGTSSQDTKAMKPLAAAEVQVEAIEDNPGYYAAKFFLRPHYQLEGL 484
             LN WI  +V      SS + ++ +PL AA+V V  +E  PG+Y     +RPH++  G 
Sbjct: 421 LELNKWIRQFVADQENPSS-EVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGA 479

Query: 485 TVSLRLVSKL 494
             +L LV KL
Sbjct: 480 DFTLSLVGKL 489