Pairwise Alignments

Query, 502 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

Subject, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  363 bits (932), Expect = e-105
 Identities = 183/430 (42%), Positives = 266/430 (61%), Gaps = 9/430 (2%)

Query: 69  VQAIITEIDRKLSEQINQILHHEEFQQLEGAWRGLHYLVNNTETDEQLKIRVMCASKREV 128
           V  ++ E+D+K+S Q+++ILH+ +FQ +E AWRGL   V+ T+  E  K+ ++  +K E+
Sbjct: 65  VDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDEL 124

Query: 129 ARSLKRHKGIGWDQSPLFKKIYEAEYGQFGGEPFGALIGDFHFDHSPPDVEMLGEMAKIA 188
               +        QS L+K +Y A YGQFGGEP GA+IG++ F  S PD+++L  M  + 
Sbjct: 125 LEDFEFAPETA--QSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALG 182

Query: 189 AAAHCPFIAGASPTVMQMDSWQELSNPRDLTKIFQNTEHTAWRSLRDSEDARYIGLAMPR 248
           A AH PFI+   P    +DS++EL N +DL   F++ ++T WRSLR+SEDARY+GL  PR
Sbjct: 183 AMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPR 242

Query: 249 FLARLPYGARTNPVDEFEFEEETDSAAHNRYTWANSAYAMGVNINRSFKQYGWCTSIRGV 308
           FL R+PY    NPV  F + E   SA+H  Y W N+A+A    +  SF +Y WC +I G 
Sbjct: 243 FLLRVPYDPIENPVKSFNYAENV-SASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301

Query: 309 ESGGAVENLPTHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIG 368
           +SGGAVE+LP H F +  G +  K PTE+ I+DR+E ELA+ GF+ L  RK SD AAF  
Sbjct: 302 QSGGAVEDLPVHVFES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFS 360

Query: 369 AQSLQLPAEYYDA----DATANANLAARLPYLFACCRFAHYLKCIVRDKIGSFREREDME 424
           A S+Q P  + +     +A  N  L  +LPY+    R AHY+K + R++IG+++ER+D+E
Sbjct: 361 ANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLE 420

Query: 425 RWLNDWIMNYVDGSPGTSSQDTKAMKPLAAAEVQVEAIEDNPGYYAAKFFLRPHYQLEGL 484
           R LN WI  YV       + D ++ +PL AA ++V  +E NPG+Y     +RPH++  G 
Sbjct: 421 RELNSWIKQYVADQENPPA-DVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGA 479

Query: 485 TVSLRLVSKL 494
              L LV +L
Sbjct: 480 NFELSLVGRL 489