Pairwise Alignments

Query, 391 a.a., T6SS component TssG (ImpH/VasB) from Variovorax sp. SCN45

Subject, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 8/270 (2%)

Query: 98  PSMAFAPSNVAGVDASQDGPPRISIYGFGLFGPNGPLPLHMTEYARERKRHHADDTLSAF 157
           PS+ F+PS+V  ++A  D    +    FGL G   PLP  + E   +            F
Sbjct: 65  PSLGFSPSDVMALEARDDERWVMLTNFFGLSGAQSPLPGFILE---QLVTEEPGGYKQPF 121

Query: 158 ADLFHHRLILLFYRAWADAQSVNSLDRPDGHRFVDYVASLMNMGQPGLKGRDRIADHART 217
            D F++RLI L YR W   +            F   + +L+ +G P L+G   I      
Sbjct: 122 LDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLRGETPINWCKML 181

Query: 218 FMAGHLVRQTRNPEGLIQILRLYFDVP-VRIEEFVSDWVRIDERQLSTLGFSGRNHQLGG 276
             AG L  ++R+P+ +  I+   FD+P V I ++V   V ID  Q   LG   +N +LG 
Sbjct: 182 AYAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQQLALG--KQNARLGM 239

Query: 277 GATVGIAVRDAQSKFRVELGPLSQQEFQELLPGSKRLRQVVDWVRQYVGIEFAWELRLVL 336
              +G +V D   KF + +  LS+  F + LP  K  + +   V   +  + A++L L +
Sbjct: 240 DTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDLELAM 299

Query: 337 RKQDAHGMQLGAGQQ--LGWGSWLGTRLAD 364
            +++A    L   Q   LGW S+LG   A+
Sbjct: 300 DEREAPLFCLDTRQNIALGWTSFLGQDAAN 329