Pairwise Alignments

Query, 456 a.a., T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain from Variovorax sp. SCN45

Subject, 257 a.a., type IV secretion protein DotU from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (314), Expect = 2e-33
 Identities = 73/226 (32%), Positives = 113/226 (50%), Gaps = 3/226 (1%)

Query: 61  LAGNNP--LVAAANPLLDLIPQIRATGHHPAPAQLREHLVDEVRRFETRAQQAGIAPEVI 118
           L G+NP  L+ AA PL  L  ++R         Q+    ++E++  E    + G    ++
Sbjct: 31  LRGDNPNVLIDAATPLFGLSLRVRTLTECDNIEQIYRQTIEEIKAIEIELTEQGYEHAIL 90

Query: 119 IGARYCLCTAVDEAAALTPWGGS-IWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQHL 177
           +  RY LC  +DE+   T WG S +W+  S+L  FHNETWGGEK F +LSRL   P ++ 
Sbjct: 91  MAYRYILCAFLDESVMGTEWGASSLWAEHSMLSRFHNETWGGEKVFTILSRLEGEPHRYQ 150

Query: 178 HLIELIYFCLALGFEGRFRVIDNGRSQLETLKQRLLQIIRQTRGEIAVPLSPHWQDASAP 237
            L+  IY CL LGFEG++RV++ G+++ E +  RL Q++          L+         
Sbjct: 151 ALLAFIYHCLILGFEGKYRVMEGGQAEREKVISRLHQLLSSLEESEPQDLTRPTDHVVRA 210

Query: 238 VRRTRNWLPVWAVGAVAAVLLLVAFALLTFNLAGTSDGAFAAVNAV 283
                  +PVW+V A   VL +  F   ++ L   S      +N +
Sbjct: 211 KYTLSRQMPVWSVFAGFIVLWVGLFLGYSYVLHSKSSDVLNQLNQI 256