Pairwise Alignments

Query, 304 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 340 a.a., D-lactate transporter, permease component 2 (from data) from Phaeobacter inhibens DSM 17395

 Score =  130 bits (327), Expect = 4e-35
 Identities = 96/335 (28%), Positives = 157/335 (46%), Gaps = 40/335 (11%)

Query: 7   MNIGLMQGFAGLSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARV---- 62
           M+  L+Q   GL   +   L+ LGL +IFG +GV+N AHG    IGA+      RV    
Sbjct: 1   MDAILLQILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTVQRVLSLS 60

Query: 63  ---TESLAPEFM--------PYY----------------FPIAIALAFVFAFIVGWIVEW 95
               +    +F+        PY                  P+AI  A      VG+++E 
Sbjct: 61  FETVDETQKDFLGNPLKVKTPYVESWFGPEVGGAIIDWAVPLAILFAIPIMIGVGYVMER 120

Query: 96  ALIRHLYKRP-LDTLLATWGVSLGLQQIFRTFIGPKEVSPTLPEWLMG--SWTPHEGLDI 152
            LI+H YKRP  D +L T+G+++ LQ++ + F G   +    P+ L G  +     G+DI
Sbjct: 121 GLIKHFYKRPHADQILVTFGLAIVLQEVVKYFYGANPIQTPAPDALNGVVNLGSIIGMDI 180

Query: 153 --PINGLFVLVLTALVTGGVLVALHKSRWGLRVRATVANRTMANATGIDTRKTDRLTFAI 210
             P+  +       ++ GG+   L  + +G+ VRA +A+R      GI+  +   + F I
Sbjct: 181 VYPVWRVVYFFFAVVIIGGIFSFLQFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGI 240

Query: 211 GCGIAGVAGAAFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLFGTVVSAFGIAQTQSVSE 270
              +AG+AG  +T I S     G  ++V +F+VV  GG  SL G V++ F +   +S + 
Sbjct: 241 AAAVAGLAGVMYTPINSPNYHMGMDFLVLSFVVVVVGGMGSLPGAVLAGFLLGVLESFAS 300

Query: 271 FFMTGSMA----KVLTLSLIVFILMLRPQGLFAVK 301
                S+     +++   + + IL+ RP+GL   K
Sbjct: 301 MNEIKSLIPGIDQIIIYVVAIIILLTRPRGLMGRK 335