Pairwise Alignments

Query, 396 a.a., Urea ABC transporter, permease protein UrtC from Variovorax sp. SCN45

Subject, 391 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  254 bits (649), Expect = 3e-72
 Identities = 139/362 (38%), Positives = 209/362 (57%), Gaps = 3/362 (0%)

Query: 19  LVLLLAVVLPLSLDIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGGYAMA 78
           L LL A   PL +  + ++L GKYLTYA +A+ L +VWG+ G+LSLG   FF +GGYAM 
Sbjct: 31  LNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGHAAFFALGGYAMG 90

Query: 79  MFLKLEASDPVTTKIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMALAWL 138
           M+L  +            P +PDFM +    ELP  W  F     +  +VVL P  LA++
Sbjct: 91  MYLMRQIG---ARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVVLVPGLLAFV 147

Query: 139 VSFAMFKRRVGGVYFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTLLGWDTRTDGAK 198
             +  F+ RV GVY +IITQA+     +         GG NG+TD K +LG++ + DG +
Sbjct: 148 FGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFNIQADGTR 207

Query: 199 YVLYYVCVGLLVLSILLCRWIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKVFIFCLAAG 258
             L+      L +S+++   I  SK G +L+A+RD E R RF GY V + K+F F ++A 
Sbjct: 208 AALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMKLFAFTVSAM 267

Query: 259 LSGIGGAMFALQVGFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVNAGKTLFSE 318
           ++G+ GA++  QVG ++P       SIE+VI+ AVGGR +L+G + GA+LVN GK++F+ 
Sbjct: 268 MAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILVNGGKSIFTA 327

Query: 319 SFPDLWLFLMAGLFIGVTMAFPMGLAGVWEEKIRPWWKSRRQALREAAVKPPATPTAAQP 378
           +FP+ WLF + GLF+ VT+  P G+ G  +  +     S   A +E+  +  A+   A+ 
Sbjct: 328 AFPEFWLFALGGLFVLVTLFLPKGVVGTAQSYLASRRTSHAAARKESESEKAASLADAET 387

Query: 379 AA 380
            A
Sbjct: 388 VA 389