Pairwise Alignments

Query, 236 a.a., Lipopolysaccharide export system protein LptA from Variovorax sp. SCN45

Subject, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 29/181 (16%)

Query: 18  LAAAALLLAGLASGALAETADRSKPMNIESDAMRYDDLKQTSVFTGNVLVTKGTIIIRGA 77
           L+  A LLA   + AL+   DR +P+ I+SD+ + D       F G+V + +G+I I   
Sbjct: 21  LSLIACLLASTQAYALS--TDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGSININAD 78

Query: 78  RLDVRQDAEGYQYGVVTAAPGKRAYYKQKRNAPDEWIEGESEVIEYDSRADNVKFIRNAE 137
           +L V ++AE  +   +    G  A + Q  +   + + GE++ + Y  R D +  I  A 
Sbjct: 79  KLIVIRNAENGKIEEIEGY-GNVATFSQLTD-EGKTLYGEAKELYYKVRDDELVMINKAM 136

Query: 138 MRRLLGSTPNDVSTGALIVYDQSNDTYTVNGSTVPPNTAVNA----SSPSGRVKTILTPK 193
           +                     S D   + GS +    ++      S   GRV T+L P+
Sbjct: 137 L---------------------SQDDSEIRGSKIRYKISLQKLIADSDGKGRVSTVLQPQ 175

Query: 194 A 194
           A
Sbjct: 176 A 176