Pairwise Alignments

Query, 459 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 479 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  171 bits (434), Expect = 4e-47
 Identities = 154/472 (32%), Positives = 221/472 (46%), Gaps = 37/472 (7%)

Query: 10  LQRDLLVWLMLPLLAVVAATGAVGTFTAQRLTDKAFDRWLLDTARSVAAQVRFP-DGHAH 68
           +++  L  L+  LL  ++         A    ++ FD  L  +AR V   V    D  AH
Sbjct: 6   IRQRTLALLLCTLLVALSLISWRSYRDASHEIEELFDAQLAQSARLVQGLVGHEMDPQAH 65

Query: 69  LDLPAATEAVL---------GYDEIDQVYFSVSEA-------------GQLLAGQHGIPH 106
             L AA +A +         G+D   ++ F V  A             G L   Q G+  
Sbjct: 66  RALQAALDAAVNARRDQGVPGHDYETKLGFQVYAADGSTLLQSAGAPNGALQQLQAGLGA 125

Query: 107 TGTRHASYRAGEAFDAFYAGHAVRVAAARIPGASEDSKVLVLVAETTRKRQRAQNEVLMM 166
             T  A   AG   D    GHA R+   +      +  + +L++E    R     ++   
Sbjct: 126 PATPLARLSAGY-HDVMLDGHAWRLFLLQ----DREDDLWILLSERGDVRGELVGKIARR 180

Query: 167 -LVPVGALLLAAAAAIGFAVRRTLNPLEAIAARWNERSHASLQPIAADDMPRELMPFATA 225
            L+P    L   A  I FAV   L PL  +A     R   +L P+    +P+EL P A +
Sbjct: 181 SLLPDLIGLPLLALLIWFAVGWGLRPLARMAQLLKSRDPDNLAPLLLAPLPQELEPVAAS 240

Query: 226 LNDLLARIRAMLTREQQFAATVAHQLRTPLAGLQLGVTRAAEAGDLESSRQVLGELGNTV 285
           LN LL ++  ++ RE++F A  AH+LRTPLA L++    A +A D +   Q L +L   V
Sbjct: 241 LNRLLQQVNQLIEREKRFIADAAHELRTPLAVLRIHAQNAQQAQDEQERAQALEQLVVGV 300

Query: 286 QRTARMVQQLLALGRLDPEVRGNLSFVPTDLAALAHDVGS--TFLEFAASRSITLELDAP 343
            RT R+V QLL L RL+P  +  L   P DL ALA    +  T L  A  +++TLE+D  
Sbjct: 301 DRTTRVVTQLLTLARLEPSAQ-QLRLAPLDLRALARATLAELTPLAIAQDQTLTLEVDEQ 359

Query: 344 AEPVMVRLQPELFSEALGNLLDNALRYTQEGGAVLIGF--DTSPPSIRVSDNGPGVPKEL 401
           A+  +      L +  L NL+ NAL YT  GG + +    D     + V D+GPG+  EL
Sbjct: 360 ADCSLTGDAASL-TTLLQNLVSNALEYTPHGGQIEVQLHGDAEQLILAVDDSGPGISAEL 418

Query: 402 YEAVFERFVRGQHVAGEGSGLGLAIVRDIAALHGATVTLSQGALGGACVTIR 453
              +FERF R     G+G+GLGL+IV  IA LHGA+V L    LGG  V ++
Sbjct: 419 RPQLFERFFR--LGGGQGAGLGLSIVARIAELHGASVELLDSPLGGLRVLVQ 468