Pairwise Alignments

Query, 459 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (322), Expect = 3e-34
 Identities = 99/321 (30%), Positives = 145/321 (45%), Gaps = 7/321 (2%)

Query: 141 EDSKVLVLVAETTRKRQRAQNEV-LMMLVPVGALLLAAAAAIGFAVRRTLNPLEAIAARW 199
           E  K  VLVAE    R  A NE+ L   +P   L+L     +   + R+  P++A+ A  
Sbjct: 131 EKGKQYVLVAEKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAI 190

Query: 200 NERSHASLQPIAADDMPRELMPFATALNDLLARIRAMLTREQQFAATVAHQLRTPLAGLQ 259
             RS   L  I  +    EL+P    LN LL  +     RE++F    AH+L+TPL  L+
Sbjct: 191 ALRSIHKLDRIYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLR 250

Query: 260 LGVTRAAEAGDLESSRQVLGELGNTVQRTARMVQQLLALGRLDPEVRGNLSFVPTDLAAL 319
           +    A  + + E  +Q L  +   ++RT R++ QLL L ++  E    L   P +LA +
Sbjct: 251 VNAENALRSTNQEQLKQDLERIFKGIERTDRLIHQLLMLAKV--ESTQTLRKQPVELANV 308

Query: 320 AHDVGSTFLEFAASRSITLELDAPAEPVMVRLQPELFSEALGNLLDNALRYTQEGG--AV 377
              V +     A  +    +L    E   +     L      NLLDNA+RY+      AV
Sbjct: 309 IKQVIADLAPIAFKQD--QQLSFHGESSRLWGDELLLGILFKNLLDNAIRYSGHSSQIAV 366

Query: 378 LIGFDTSPPSIRVSDNGPGVPKELYEAVFERFVRGQHVAGEGSGLGLAIVRDIAALHGAT 437
            +        +RVSD G  +     E +F+ F R     G+G+GLG++I RDIAALHG  
Sbjct: 367 ELSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQ 426

Query: 438 VTLSQGALGGACVTIRFAQAE 458
           V L           +RF   E
Sbjct: 427 VLLLPRTDERNTFVVRFRNCE 447