Pairwise Alignments

Query, 597 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (364), Expect = 2e-38
 Identities = 124/401 (30%), Positives = 195/401 (48%), Gaps = 24/401 (5%)

Query: 200  LEENIGLRLNE-RTLREQALAGLRASEQAQAERLRFFSAANHDLRQPVMAIGLQAEVLRQ 258
            LEE +  R  E   L +Q +   + SE+    + RF +A +HDL QP+ A  L A  L  
Sbjct: 757  LEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSL-S 815

Query: 259  QLESGADTHAVQHTVASLARAQQALEGLTNQLLEIGRIEAAVDPLRPEAVALAPLLQELA 318
            ++   A+   + H + S   A  A E L + LL+I R+E+    L P + A+  +L  L 
Sbjct: 816  EVAKEAEVQKLAHHIES---ALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLN 872

Query: 319  RQ--AGNGRVGVR---CPTNAVAWTDTVSLRRVLANLVDNAVKFTPRGRVLLAVRTRERE 373
             +  A   + GV+    P+     +D   LRRV+ N + NA ++ P G+V+L VR   R 
Sbjct: 873  AEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVR---RV 929

Query: 374  SGRAWRIEVRDSGIGIPADAQERVFNDFEQIGNVERNLQRGHGLGLAIVRRLAAQLGIEV 433
            +    RI+V D+GIGI  D Q+ +F +F + G V  +  +G GLGLAI + +A  LG  +
Sbjct: 930  ATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSD--QGLGLGLAISKGIAHVLGHHI 987

Query: 434  ALRSAPGRGSVFSFELPAAP--EGAAVARIRPLPQAGTGASHALPSGLAVLVVEDNAVVA 491
            ++RS PG+GSVFS  L  A     +    +  + + G+   H     L VL V++   + 
Sbjct: 988  SMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEKGSELQH-----LRVLCVDNEPDIL 1042

Query: 492  DSLLALLRQWGVAPRVYASAAEAL-ALADLHALDAALCDIRLPGALDGIALAERLQ-RQK 549
              +  LL +WG   +       +L AL      D  L D RL     G+ + ++ + R  
Sbjct: 1043 VGMRDLLERWGCEVKTATDIHGSLKALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLG 1102

Query: 550  PSLTIVLISADINEATQRLALERGWHALRKPVQPDELHGVL 590
                 V+ISAD N          G+  + KP++P +L  +L
Sbjct: 1103 DCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRALL 1143