Pairwise Alignments

Query, 597 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  127 bits (319), Expect = 2e-33
 Identities = 118/401 (29%), Positives = 184/401 (45%), Gaps = 21/401 (5%)

Query: 208 LNERTLREQALAGLRA-SEQAQAERLRFFSAANHDLRQPVMAIGLQAEVLRQQLESGADT 266
           + ER   E  L   R  +E A   +  F +  +H++R P   I     VL   L +  + 
Sbjct: 330 VTERKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGI---LGVLDLLLHTPLNE 386

Query: 267 HAVQHTVASLARAQQALEGLTNQLLEIGRIEAAVDPLRPEAVALAPLLQEL--------A 318
              ++   +    +Q L  + N +L+I +IEA    + PE V L  LL EL        A
Sbjct: 387 KQERYIRLAYGSTKQLL-AILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAA 445

Query: 319 RQAGNGRVGVRCPTNAVAWTDTVSLRRVLANLVDNAVKFTPRGRVLLAVRTRERESGRAW 378
           ++    R  ++         D V LR+++ANL++NA+KFT  G V L +       GR  
Sbjct: 446 QKGLEFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIECTRIAPGRQH 505

Query: 379 -RIEVRDSGIGIPADAQERVFNDFEQIGNVERNLQRGHGLGLAIVRRLAAQLGIEVALRS 437
            R+EVRDSGIG+P + QE +F+ F Q  +    L  G GLGL I ++L   +   + + S
Sbjct: 506 LRVEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSS 565

Query: 438 APGRGSVFSFELPAAPEGAAVARIRPLPQAGTGASHALPSGLAVLVVEDNAVVADSLLAL 497
             G GS F F++        V+ +  LP AG+  + ALP    +L+V+D     + L   
Sbjct: 566 NSGEGSCFWFDIELPESDPTVSPVPVLP-AGSPIT-ALPRDTRILLVDDTEANREVLAEY 623

Query: 498 LRQWGVAPRVYASAAEALALADLHALDAALCDIRLPGALDGIALAERL---QRQKPSLTI 554
           L Q     R  A+  EA+ LA+    DA L D ++ G +DG     ++   + Q+    I
Sbjct: 624 LAQAHCQVRQAANGLEAVTLAESWQPDAILMDCQMAG-MDGYEATRQIRIQEGQRRRTPI 682

Query: 555 VLISADINEATQRLALERGW-HALRKPVQPDELHGVLLKAL 594
           + ++A +    +   L  G    L KPV    L   + K L
Sbjct: 683 IALTAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATIGKWL 723