Pairwise Alignments

Query, 409 a.a., 23S rRNA (guanine(2445)-N(2))-methyltransferase (EC 2.1.1.173) from Variovorax sp. SCN45

Subject, 711 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  215 bits (548), Expect = 3e-60
 Identities = 147/411 (35%), Positives = 208/411 (50%), Gaps = 33/411 (8%)

Query: 4   LSFFLPCAAGVEEFLAQEVHALTGRAGQDLLTLRGGVRVRADWRDALKLNLHSRLAQRVL 63
           L+FF     G E  L+ E+ A  G A  ++     GV   A    A ++ L SRLA R++
Sbjct: 2   LNFFAAAPRGYEYALSLEL-AEFGAA--EIKESVAGVYFSAPLNLAYRITLWSRLASRII 58

Query: 64  VELAHAPYRSENDLYAIANGVAWEIWFTPKQTFKIETTAQHSPLQSLNFATLRIKDAIAD 123
           + +   P  +   LY  A  + W+  F+ K +F I+       +++  F  L+IKDA+ D
Sbjct: 59  LVIYKGPCENPEQLYNAAYCIDWQTHFSNKSSFSIDFHGVGGFIKNSQFGALKIKDAVVD 118

Query: 124 RFRAKANGVRPSIETQWPDCRVFAHLTTDTCTLYIDTSGEPLFKRGWRQDKGDAPLKETL 183
           RFR      RP +     D ++ AH      TL I+ SG  L +RG+R   G+APLKE L
Sbjct: 119 RFRDDGCP-RPDVARVDADFKIDAHYRRGQITLGINFSGPALHQRGYRSTTGEAPLKENL 177

Query: 184 AAAMLAASGWWNPETGEVSAQPLYDPCCGSGTIAIEAAQIARGI-PAGSLRRFGFEKLLP 242
           AA ML  SGW      + S + L DP CGSGTI IEAA +A  I PA   RRFGFE  L 
Sbjct: 178 AANMLVRSGW------QQSPKDLLDPFCGSGTILIEAAMMACDIAPALQRRRFGFEHWLR 231

Query: 243 FQAHVWTAIKKEAEA----GVADNGVAIFGSDVSHRMVDFAERNAERAGVAQAVEFRGGD 298
            Q   W  +  EA+A    G     +  +GSD+  R+V  A+RNA+ AGVA+ +E    +
Sbjct: 232 HQEADWQELLAEAKARASIGTKRCEIKFYGSDIDSRLVALAKRNAQNAGVAELIELSVSN 291

Query: 299 ALQRMPPVEAGVIMLNPPYGERIEVGGVAGTGRSGARESAQTEQGDGGEFFPQLAAHWKK 358
           AL   PPVE G ++ NPPYGER+  G V                    + + QL    K 
Sbjct: 292 ALNVTPPVEQGYLITNPPYGERL--GNVTSL----------------LQLYYQLGDKLKA 333

Query: 359 NYAGWTAWVLTPDLKLPKQMRLKESRRVPMWNGPIECRLFRFDMVAGSARK 409
            + GW   VL  D++L   ++LK  +++ M+NG +EC    + + A S R+
Sbjct: 334 EFGGWQVAVLNSDIELLSALKLKADKQMKMYNGALECAFNLYTLHANSTRR 384