Pairwise Alignments

Query, 1042 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1035 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

 Score = 1216 bits (3147), Expect = 0.0
 Identities = 626/1024 (61%), Positives = 786/1024 (76%), Gaps = 3/1024 (0%)

Query: 1    VIDRLIAFSLTQRVFVMVLVAALVGFGAYALSNLPIEAFPDVQDVQVRVISQLPGQAPED 60
            +++RL+ F+L QR+FV+V V  L+  G YA+ NLPIEAFPDVQDVQV +++Q PG APE+
Sbjct: 1    MLERLVTFALAQRLFVIVGVLVLIAVGGYAVVNLPIEAFPDVQDVQVNIVTQAPGLAPEE 60

Query: 61   MERTVTLPIEREVSGIPKLSNVRSVTMTGLSIVTLTFADGTDDYFARQQVTEKLSTVTLP 120
            +ER+++LPIERE++G+P+++ +RSV++TGLSIVTLTFAD TDDYFARQQVTEKL  V LP
Sbjct: 61   VERSISLPIEREMNGVPRMTQLRSVSITGLSIVTLTFADNTDDYFARQQVTEKLQNVVLP 120

Query: 121  TGVQPQLAPLSTAVGEVYRYTIEG-GGLTDAQLRTLQDWTVRPFLRMTPGVADVVSFGGA 179
             G QP LAPL+TAVGE+YRY  E    +   ++R LQDW VRP LR   GVADVVSFGGA
Sbjct: 121  PGAQPGLAPLTTAVGEIYRYVFEAPADMPLHEVRALQDWVVRPALRRVTGVADVVSFGGA 180

Query: 180  ITEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGDASLVVRSAGLFASLADI 239
            + EYQV +DP  LRK+ V++DQ++QA+ + N +AGGG+MR+GD +LVVRS GL + + DI
Sbjct: 181  VKEYQVRIDPARLRKFAVSIDQVSQALASNNANAGGGIMRRGDEALVVRSIGLLSKVDDI 240

Query: 240  RSVVIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSVVEGIVSMTKGGNPAKINAEL 299
              V +A R G+ I V DVA V  G R R GIV+ + RD VV+GIV M+KG N  K++A L
Sbjct: 241  ARVTVAVRDGKPILVGDVARVEIGPRTRSGIVSFNERDDVVQGIVQMSKGQNAIKVSAAL 300

Query: 300  KQRIGQLQAKLPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVIAVLIVFLSSWRAAL 359
            K+ + ++  +LP GVR+VP+YDR ELV+HTV TV+ENL+VGA+LV+ +LI+FL SW AA 
Sbjct: 301  KEEMARVGERLPAGVRLVPIYDRIELVKHTVHTVSENLLVGAVLVVGILILFLRSWFAAA 360

Query: 360  IVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMVRLAAKSVGDI 419
            +VA VIPL+LL AF++M+ +GV+ANLISLGAVDFGIIID AVV+VEALMVRLA       
Sbjct: 361  VVAVVIPLSLLTAFVMMHTKGVAANLISLGAVDFGIIIDGAVVLVEALMVRLAMGEPEKN 420

Query: 420  ASPEARHQRMGVLHRTLSDLAHPVLFSKAIIILAFVPIFTFQRVEGKIFTPVALTLSFAL 479
                    RM  L  T  ++ HP++FSKAIIILAF+PIFTF+RVEGKIF P+A TLSFA+
Sbjct: 421  PLHGTLQWRMLTLKHTAIEMGHPIIFSKAIIILAFLPIFTFERVEGKIFAPMAYTLSFAI 480

Query: 480  LGAVLLTFTLLPTLLSYALQRGTLAEKHKPWLDWLQMRYRKLVMFTMRRGRVTLLLSAVP 539
            +GA+LLT TL P L S+ L++  LAEKH  W+  LQ RYR L+ +   R R  ++ S + 
Sbjct: 481  IGAILLTLTLTPALTSFYLKQHNLAEKHLDWMHRLQGRYRDLMQWADGRRRQIVVGSGLI 540

Query: 540  VALALLLAPRLGSEFLPKLDEGNIWLTVTLPTSAALETTKEVEHVVRAKLLAYPEVARVI 599
            +AL+L L P LGSEFLPKLDEGNIWLTVTLP +  L  TKEVE  VR  LL+YPEV++VI
Sbjct: 541  LALSLALVPHLGSEFLPKLDEGNIWLTVTLPPATNLAKTKEVEQEVRRILLSYPEVSKVI 600

Query: 600  AQVGRPDDGSDPKGPNNLEILVDLKPREQWRFASKEDLVASMSAQLDGIPGISANFSQVI 659
            A VGRPDDG+DPKGPNN+EIL DLKP  +WRF SKE L+A MS ++  IPG+  NFSQVI
Sbjct: 601  AHVGRPDDGTDPKGPNNMEILADLKPHNEWRFPSKEALIADMSGKIRAIPGVPTNFSQVI 660

Query: 660  QDNVEEALSGFRGEIVAKIIGNNLDILDDKGAEVASVIKGIRGATDVDATRIGGQTEVVI 719
            +DNV+E++SG +GEI  KI G +LDIL+DK  +V  V+  I GA DV A ++ GQTE+ I
Sbjct: 661  EDNVQESISGVKGEIAVKIFGPDLDILEDKAEQVVGVLGAIHGAADVAAIKVSGQTELDI 720

Query: 720  TPDRARLARYGMAINDVNTLVNQAMSGTSVTGFYDADKRFDVVVRVGDRHRNSVDAIAGL 779
            T DR R+ARYG++  DVN  V  A++G++V  FYD D+RFD+VVR+   +R++VD +A L
Sbjct: 721  TLDRERMARYGISAQDVNATVQTALAGSAVAVFYDGDRRFDIVVRLEKEYRDAVDDVADL 780

Query: 780  QLAVPGTQ--SGNGPGTIALGDVATIEVKQGASRIFRESGSRMVIVKVNLLGRDQGSFVE 837
             +A+P +   S   PGTI L  +A++EV+QG +RI RE+G R V VK NLLGRDQGSFV 
Sbjct: 781  PIALPHSDHPSLADPGTIPLAAIASVEVRQGPARIAREAGGRYVAVKANLLGRDQGSFVA 840

Query: 838  EAQRTVAEQVKLPPGYELTWGGQFENSQRAAKRLMVIVPLTALLIFSLLFWAFRSVRLAG 897
            EA   V E+V LP GY +TWGGQFEN QRA KRL VIVPL+ L IF LLFWAFRS+  A 
Sbjct: 841  EAMAKVKERVHLPNGYSMTWGGQFENQQRATKRLAVIVPLSVLGIFVLLFWAFRSMPFAL 900

Query: 898  LVLGMIPFTLVGGLAALALADLHLSVSAAVGFIAVAGISVQNGVILVEEVTQRVRDGSAV 957
            LVLGM+PFT VGG+  LA A LH+SVSAAVGFIAVAGISVQNGVI+VE+  + VR+G +V
Sbjct: 901  LVLGMVPFTWVGGILGLAAAGLHMSVSAAVGFIAVAGISVQNGVIMVEQFLEGVRNGQSV 960

Query: 958  ARAIVEGAAVRLRPILMTALMAGLGLLPAALSHGIGSETQRPFACVIVGGIVSGTLFTLL 1017
            A ++ EGA  RLRPILMTALMAGLGLLPAALSHGIGSETQRPFA VIVGGIVS T+FTL+
Sbjct: 961  AVSVREGAVGRLRPILMTALMAGLGLLPAALSHGIGSETQRPFAVVIVGGIVSATIFTLI 1020

Query: 1018 VLPL 1021
            +LPL
Sbjct: 1021 LLPL 1024