Pairwise Alignments

Query, 521 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 495 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  184 bits (468), Expect = 5e-51
 Identities = 150/521 (28%), Positives = 234/521 (44%), Gaps = 49/521 (9%)

Query: 5   MARGLRTAVALACAVWLGGCAVGPDYARPALAASEGFSPKPLPEVTASAPVAAGGAQRFV 64
           +   LR       A+ LG C +GPDY RP L  +  F      +     P     A +  
Sbjct: 11  LKHALRPLAVAVLALSLGACTLGPDYQRPDLPVASEFK-----QAEGWKPATPADALQ-- 63

Query: 65  RTQDIQAEWWKLFQSKALDAVIEKAFAANPTVESAQAALRIAQENVRAQRGFFYPTVQAS 124
                + EWW+L+    LDA++ +   +N  + +A+A  R A+  VR  R   +P +  S
Sbjct: 64  -----RGEWWRLYGDAELDALVSRLNVSNQNIAAAEAQFRQARALVRGARSQLFPILSGS 118

Query: 125 YSPARTKIAGNLGGNSPGVQGNGTVISTTANPSAQEGGTAPFNAPVIYNFHTAQLTVGYT 184
                        G S   QG+G   ST++  S   GG            + A L+  + 
Sbjct: 119 ------------AGVSRSAQGSG---STSSTGSTFNGGVG--------ESYEAGLSASWE 155

Query: 185 PDVFGGNRRQVEALEAQATYQQLQLEATYLTLAANVAAAAIQEALLRQQIASTREIVELN 244
            D++G  RR +EA  A        L A  L+L A +    +Q  ++ +      + VE  
Sbjct: 156 ADIWGRLRRNLEANRANMQASAADLAAARLSLQAELVQTYLQLRVIDEHQRLLDQTVEAY 215

Query: 245 TQSVALLNRQLKAGYASRLDLALQENALAQASQLLPPLEKQFEQNRNLLRALTGGVQDVE 304
            +S+ L   Q +AG   R D++  +  L         L+ Q  Q  + +  L G V   E
Sbjct: 216 ARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQAQAIDLKWQRAQMEHAIAVLVG-VAPSE 274

Query: 305 LPQTFDLASLQLPESLPLSLPSQVVAQRPDVRAAEEQVHAASAQVGVAIAARLPQFSIDA 364
           L          LP ++PL++PSQ++ +RPD+ +AE QV AA+A +GVA AA  P+ ++ A
Sbjct: 275 LGIAVREDIPPLP-AIPLAVPSQLLERRPDIASAERQVMAANANIGVAEAAWYPELTLSA 333

Query: 365 TWGGAASQFSQMFLNSGRFFSLTGNIAQPLFDAGVLKSRQRAAEEALKQAQAQYRATAIT 424
           + G   S FS +F    RF+SL   +A  L D G  ++    AE +  Q  A YR T + 
Sbjct: 334 SGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGGRRAELERAEASYDQTVASYRQTVLN 393

Query: 425 AFQNVAD---TLQAIHSDARALRAAVELERTSRTSMELIGRQLSKGYVDRLALLTAQQ-- 479
           +F+ V D    L+ +  +A   R A+E    ++ S+ LI  Q   G VD L++ T Q   
Sbjct: 394 SFREVEDYLVQLRVLEEEAVVQREALE---AAQESLRLIENQYRAGTVDFLSVATVQTTA 450

Query: 480 -NHHQATMALAQAQAARLGDTAALFQALGGGWWNRVAQASP 519
            N+ +  + L      RL  +  L  ALGGGW  +  + +P
Sbjct: 451 LNNQRTNLTLL---GDRLTASVLLIAALGGGWDAQQLELAP 488