Pairwise Alignments

Query, 884 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  230 bits (587), Expect = 3e-64
 Identities = 148/444 (33%), Positives = 217/444 (48%), Gaps = 16/444 (3%)

Query: 68  GIVTSFGLAQEDARRSFYKMRLRPWLWLATRRSDFRVFQERTVPEIITAVLARYG---YP 124
           GIV +F         +FY++ L P L   + R + R+FQ++TVPEI++ +L   G   Y 
Sbjct: 81  GIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYA 140

Query: 125 MEQKLRHSYRAWNYCVQYGEDDCSFIARLCEHEGIHFHFRHEADRHVLVFADDIAGSHGP 184
              K     R   +CVQY E D  F+ RL   EG+ + F HEA +H L F+D  + S   
Sbjct: 141 FALKRDGVQR--EFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSD-ASDSLSK 197

Query: 185 LPGGETVRYHPHEQSGMTGGPEPGERIHEWELVEEVRSGRHYRSHFDFEHPGAD-LSFMR 243
           LP        P   + + GG      IH      +          + F+ P    L  ++
Sbjct: 198 LP-------EPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250

Query: 244 RASPGHEHDDHELYEWPGNHVRHDDGETCARIRNEEQLSGRSRARGRSNLRELAPGHTMR 303
                ++   ++ ++ PG +    +G   ++IR +        A G+SN   L  G+   
Sbjct: 251 GTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFD 310

Query: 304 LTGHPRADQNRQYLLLGVSYHLRENLEASEGTGHAEGSFQRFAFDALPTSCAWRPPRTTP 363
           L  H     NR ++++ ++ H  E  +A +  G +  +     F  +P    WR     P
Sbjct: 311 LQEHLDPAMNRDWVVVSIN-HQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRA-EPQP 368

Query: 364 KPRTDGPQTALVVGPAGEEIWTDRYGRVKVRFHWDRLGRHDEHASCWVRVSTSWAGAAFG 423
           KP+ DGP  A VVGP GEEI+ D +GRVK+ F WDR    +E +SCWVRVS  WAG+ +G
Sbjct: 369 KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYG 428

Query: 424 AAALPRIGQEVIVDFLNGDPDFPIITGRVHNADEMPAWQLPGQAHLSGIRSREPGGGRSN 483
             A+PRIG EVIV+FLNGDPD PIITGR ++A   P + LP     + +R+    G   N
Sbjct: 429 FIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFN 488

Query: 484 HLALDDTNGKVQAQLRSDHQSSSL 507
            L+ +D  GK Q  L +      L
Sbjct: 489 ELSFEDQAGKEQIYLHAQKDFDGL 512