Pairwise Alignments

Query, 569 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 549 a.a., Channel-forming transporter/cytolysins activator of TpsB family from Pseudomonas fluorescens FW300-N2E2

 Score = 94.7 bits (234), Expect = 8e-24
 Identities = 106/447 (23%), Positives = 181/447 (40%), Gaps = 27/447 (6%)

Query: 53  LAQAPGTVAPQSLPAPPKPAGASFRLNDLRLNGVKALSNEELQTITSPYIGREVTLSDLE 112
           L   PG  A  + P  P      F +  + L G  ALS+ E + +  PYIG+ + +  L 
Sbjct: 34  LKDLPGKEAKPTQPTAPVDTRC-FPIKTIELKGADALSDAERERLLKPYIGQCLGVPQLN 92

Query: 113 ELAKAITARYKERGYFLAQAVVPVQTVRDGIVEISVIEGRLGKVDVVVAPDAPIAEARVR 172
           EL K IT  Y ++G   ++A +P Q +  G +++ V+EGRL    +  A ++ +++ R  
Sbjct: 93  ELLKVITDHYLDKGLVTSRAYLPQQDLSSGHLQVLVVEGRL--EGLKGAENSQLSD-REL 149

Query: 173 GFLAPLQPGEAVSAPAYERAMLLLSDQPGIKVSSGLQEGTQAGTTDLSVEVAPAPRWAFT 232
               P + GE ++    E+ +  ++  P  +    L  G   G +++ V   P   W   
Sbjct: 150 AMAFPGKTGELLNLREMEQMVDQMNRLPSNRAQMELTPGQNIGGSEVRVNNTPQKPWRAG 209

Query: 233 AEGDNYGTKESGRYRVGGTARWLSPFGIGDNLDMR---LMVSD-SNALQFGRIAYEAPIG 288
               N G K +G  + G +  W SP G+ D L +R     VSD     + G + Y  P G
Sbjct: 210 LSRHNEGQKSTGEQQWGASLDWDSPLGLADQLALRGGHDAVSDHQKTSRNGMLYYNLPFG 269

Query: 289 TSGLRAGVGLSRVSYELGGQFVDLDARGRADVLDFS--LSYPVIRQRQQNLFLRLGVD-- 344
              L      S+  Y   GQ    + +   D  +    L   V R       L  G+   
Sbjct: 270 WWNL--SYTYSQSEYRAVGQANGFNFKQSGDSQNHQVRLERVVHRDAVSKTSLNTGLSYL 327

Query: 345 -VKDLTDELRAADFTSKKRVNGLSLGWTWERRDELLGGGYWASSGTLYHGNLSIRDPESR 403
              +  ++ + A+  S  R++    G    RR   +G  +      L  G  ++      
Sbjct: 328 RTNNFIEDSKLAE--SSNRISEAQFGINHGRR---IGNAFVNLDLGLQQGIGALDAQGDH 382

Query: 404 DFDRGITGHHTEGGFTKLSFQFSRLQAIV---PRHSLYLSLGGQWASKNLDASEKLALGG 460
           +   G+     +  + K +   S LQ  +      S    + GQ +   L + ++++LGG
Sbjct: 383 EPGPGL----PDARYRKYTATLSYLQPFMLGGESFSFSSLMTGQRSEDVLFSPQRMSLGG 438

Query: 461 ARAVRAYPSGELLVDQGLIGTVEWRWS 487
             ++R Y    L  D G     + RWS
Sbjct: 439 LSSIRGYKDQTLSGDSGGYWRNDLRWS 465