Pairwise Alignments

Query, 630 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

 Score =  202 bits (514), Expect = 7e-56
 Identities = 142/446 (31%), Positives = 237/446 (53%), Gaps = 25/446 (5%)

Query: 178  SEPIRALGKAVDRLGAGEDASVVVEGTSEVRHLQHGFNQAARALAESHRLLQSRINEATA 237
            SE +   G+ V+ +G        V   S++      + +A RAL +++  L+ R++E T 
Sbjct: 715  SERLFPNGRVVELIGNPMPGGGFVMSFSDIT----AYREAERALKDANEGLEQRVSERTQ 770

Query: 238  ELARKNQQL-------EVASQAKTRLLAAASHDLRQPLHALTLFSDGLANGETD-PLKLQ 289
            EL++ NQ L       E A+Q+KTR LAA SHDL QPL+A  LFS  L++ ++  P + Q
Sbjct: 771  ELSQLNQALIEAKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQ 830

Query: 290  R-IGHIRECVDSLDRLFSELLNLSQLDAGVLQPQWADFPLDRLFDEISRNFRPVAEQQGL 348
              + H+   + S + L ++LL++S+L++G + P    FPL  LFD +   F  +A +QG+
Sbjct: 831  ELVQHLDSSLRSAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGV 890

Query: 349  RLVVRKTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLIGARRRGKGVRIDVVDTGVGI 408
               V  + + V  D  +L R+L N ++N+ R+  +G V++G RR+G  +R++V D G GI
Sbjct: 891  NFRVHGSKLRVDSDIRLLRRVLQNFLTNAFRYA-KGRVVLGVRRQGASLRLEVWDRGPGI 949

Query: 409  APQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLADLLNTRVELSSKLHKGTCVR 468
                   +FEEF +++       R  +G+GLGLA    L  +L   +E+ S   KG+   
Sbjct: 950  PQDKLKVIFEEFKRLD---SHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFS 1006

Query: 469  VLVRSAPA-ALPAPALSAALAGIEEEESLANVRILVIDDERTILEGLAVVLANWGAEVLP 527
            V V  A A + P P +     G  +  +L   ++L ID+E +IL G++ +L  WG +V  
Sbjct: 1007 VTVPIARALSQPRPVVK---RGEPQHSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWT 1063

Query: 528  AQTRAEALALADGWAQPPDVVISDLLLQGGDNGLDVIAALERHPHGIGPGTARLLVTGET 587
            A  R E  AL     + P +V+ D  L  G  G +++A L      +G     ++++ + 
Sbjct: 1064 ASNRDECEALLAEDIR-PQLVLVDYHLDEGQTGTELMAWLRTR---LGEPVPGVVISADG 1119

Query: 588  KPDRLREVANAGITVLYKPVSPRVLR 613
            +P+ +  +  +G+  L KPV P  LR
Sbjct: 1120 RPELIAAIHASGLDFLAKPVKPAALR 1145