Pairwise Alignments

Query, 630 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (322), Expect = 1e-33
 Identities = 101/376 (26%), Positives = 188/376 (50%), Gaps = 38/376 (10%)

Query: 133 GKVMVEISLGAVQSARRSVWLNVTLVLAFSLVGVGLAGWWAARR---ISEPIRALGKAVD 189
           G + +E+ L +++  +     +  LVL   ++G+ L+G +A+R    ++ PI  +   VD
Sbjct: 156 GYIAIELDLSSLRLQQYQEIFSAGLVL---VIGILLSGVFASRLMYDVTRPITHMKNMVD 212

Query: 190 RLGAGEDASVVVEGT--SEVRHLQHGFNQAARALAESHRLLQSRINEATAELARKNQQLE 247
           R+  G    V +EG    E+  L+ G N  A +L+E H  +Q  I++AT++L    +QLE
Sbjct: 213 RIRRGH-LDVRIEGKMHGELDTLKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLE 271

Query: 248 V--------------ASQAKTRLLAAASHDLRQPLHALTLFSDGLANGETDPLKLQRIGH 293
           +              A++ K+  LA  SH+LR PL+ +  F+  +   +    +   +  
Sbjct: 272 IQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQT 331

Query: 294 IRECVDSLDRLFSELLNLSQLDAGVLQPQWADFPLDRLFDEISRNFRPVAEQQGLRLVVR 353
           I +  ++L  + +++L+ S+L+AG L  +   F    + +E+       A ++GL + ++
Sbjct: 332 IEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLK 391

Query: 354 ---KTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLIGARRRGKGVRIDVV-------D 403
              K    V  D + + ++L NLV NS++ T  G + +    R   +R DV+       D
Sbjct: 392 IDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMR--ALRDDVIDLQFMVRD 449

Query: 404 TGVGIAPQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLADLLNTRVELSSKLHK 463
           TG+GI+ + QA++F+ F Q + +    +R   G GLGL   Q+L   +   + L+S+LH+
Sbjct: 450 TGIGISERQQAQLFQAFSQADAS---ISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQ 506

Query: 464 GTCVRVLVRSAPAALP 479
           G+     +R     LP
Sbjct: 507 GSTFWFTLRLHTTELP 522