Pairwise Alignments

Query, 630 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (335), Expect = 4e-35
 Identities = 134/494 (27%), Positives = 225/494 (45%), Gaps = 39/494 (7%)

Query: 162 SLVGVGLAGWWAARRISEPIRALGKAVDRLGAGE--DASVVVEGTSEVRHLQHGFNQAAR 219
           ++V V +A  + +  I+ P+  L  A +R+ AG+  +A +  E   E+  L   F +  R
Sbjct: 364 AIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQR 423

Query: 220 ALAESHRLLQSRINEATAELA---RKNQQLEVASQAKTRLLAAASHDLRQPLHALTLFSD 276
           ++ E   L++S+  E  + L    ++N +L++A++ K   LA  SH+LR PLH +   ++
Sbjct: 424 SIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAE 483

Query: 277 GLANGETDPLKLQRIGHIRECVDSLDRLFS---ELLNLSQLDAGVLQPQWADFPLD---R 330
            L +G   P+       +   + S  RL +   +LL+  ++  G L  Q     L    R
Sbjct: 484 ALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATR 543

Query: 331 LFDEISRNFRPVAEQQGLRLV--VRKTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLI 388
           L  E+S +   +  ++ LR++  V +  VWV  D   L ++L NL+ N++++T EG ++I
Sbjct: 544 LVLELSHH---LLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVI 600

Query: 389 GARRRGKGVRIDVVDTGVGIAPQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLA 448
            A      VR+ VVDTG GI  +    +FE   Q    G  A+R  +G GLGL+  ++L 
Sbjct: 601 SATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQ---AGHDASRYRQGAGLGLSISRQLI 657

Query: 449 DLLNTRVELSSKLHKGTCVRVLVRSAPAALPAPALSAALAGIEEEESLAN---------- 498
           +L++  + +SS+   GT     +  A     A A    L   +  E L +          
Sbjct: 658 ELMHGTLYVSSQPMVGTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDSELPEQSNLPE 717

Query: 499 ----VRILVIDDERTILEGLAVVLANWGAEVLPAQTRAEALALADGWAQPPDVVISDLLL 554
                 +LV DDE   L  L   L   G  V  AQ   + L       + P++V+ D+++
Sbjct: 718 NEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIK--REKPELVLLDIMM 775

Query: 555 QGGDNGLDVIAAL-ERHPHGIGPGTARLLVTGETKPDRLREVANAGITVLYKPVSPRVLR 613
             G +G  V   L + + H   P    +L       DR+R         L KP + + L 
Sbjct: 776 P-GMSGYQVCEKLRQTYDHAELP--IIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA 832

Query: 614 QAIQAQRAAAAALL 627
             I A   A+ A L
Sbjct: 833 ARIVAHLTASKAEL 846