Pairwise Alignments

Query, 630 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1168 a.a., sensory transduction histidine kinase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  226 bits (575), Expect = 6e-63
 Identities = 149/422 (35%), Positives = 233/422 (55%), Gaps = 27/422 (6%)

Query: 217  AARALAESHRLLQSRINEATAELARKNQQL-------EVASQAKTRLLAAASHDLRQPLH 269
            A  AL +++  L+ R+ E T EL R N++L       E A+  KTR  AAA HD+ QPL+
Sbjct: 758  ADMALKQANETLELRVAERTGELTRVNRELGEARAAAEEANIGKTRFFAAAGHDILQPLN 817

Query: 270  ALTLFSDGLANGETDPLKLQRIGHIRECVDSLDRLFSELLNLSQLDAGVLQPQWADFPLD 329
            A  L+S  L     D      + +I   ++S++ +   +L++S+LD G ++P+    PLD
Sbjct: 818  AARLYSSSLVERLGDSDNRALVQNIDSSLESVEAILGAVLDISRLDTGAMKPRLQSVPLD 877

Query: 330  RLFDEISRNFRPVAEQQGLRLVVRKTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLIG 389
             L   I  +F P+A  + + LV+  T +  R D  +L R++ NLVSN++++T+ G VL+G
Sbjct: 878  ELLRRIETDFAPMARAKDIELVIMPTSLAARSDPNLLRRLVQNLVSNAIKYTLRGKVLVG 937

Query: 390  ARRRGKGVRIDVVDTGVGIAPQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLAD 449
             RR G+   I+V+D+G+GI       +F+EF ++E    + AR A G+GLGL+ V R++ 
Sbjct: 938  VRRHGQTATIEVLDSGIGIPSSKFRTIFKEFARLE----EGARTASGLGLGLSIVDRISR 993

Query: 450  LLNTRVELSSKLHKGTCVRVLV---RSAPAALPAPALSAALAGIEEEESLANVRILVIDD 506
            +LN  V L SK  KGT  +V V   +SA   L   +++AA    +  E+LA + ++ ID+
Sbjct: 994  VLNHPVGLQSKPGKGTGFKVTVPLDKSAGGRLKPQSVAAA----KTSEALAGLNVICIDN 1049

Query: 507  ERTILEGLAVVLANWGAEVLPAQTRAEALALADG-WAQPPDVVISDLLLQGGDNGLDVIA 565
            E  ILEG+A++L  WG  V  A++ A    +A G     PD +I+D  L G   G++ IA
Sbjct: 1050 EPKILEGMALLLGGWGCSVTTAESLAGCTEMAPGRLGVRPDAIIADYHL-GDGTGVEAIA 1108

Query: 566  ALERHPHGIGPGTARLLVTGETKPDRLREVANAGITVLYKPVSPRVLR----QAIQAQRA 621
            A+        P    L+VT +  P+        G+++ +KPV P  LR    Q   A RA
Sbjct: 1109 AIRGLWQESIPA---LMVTADRSPEVRGAAERDGVSLQHKPVRPAALRAWLTQLAAAGRA 1165

Query: 622  AA 623
            AA
Sbjct: 1166 AA 1167