Pairwise Alignments

Query, 442 a.a., T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain from Variovorax sp. SCN45

Subject, 257 a.a., type IV secretion protein DotU from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (319), Expect = 4e-34
 Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 4/208 (1%)

Query: 55  NPLVSAAGKLLVLIGKLRNLAQPPSVPALRASTADAVNQFDANARRAGVSNESVLAARYV 114
           N L+ AA  L  L  ++R L +  ++  +   T + +   +      G  +  ++A RY+
Sbjct: 37  NVLIDAATPLFGLSLRVRTLTECDNIEQIYRQTIEEIKAIEIELTEQGYEHAILMAYRYI 96

Query: 115 LCTALDEAVANTPWGVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELI 174
           LC  LDE+V  T WG  + W + S+L +FHNETWGGEKVF +L++L  +   ++ LL  I
Sbjct: 97  LCAFLDESVMGTEWGASSLWAEHSMLSRFHNETWGGEKVFTILSRLEGEPHRYQALLAFI 156

Query: 175 YSVLALGFEGRYRVVDNGRAQLDSVRQRLADLIAKDRPPVEPELSPHWRGQGAGTVRLRE 234
           Y  L LGFEG+YRV++ G+A+ + V  RL  L++        +L+            L  
Sbjct: 157 YHCLILGFEGKYRVMEGGQAEREKVISRLHQLLSSLEESEPQDLTRPTDHVVRAKYTLSR 216

Query: 235 SLPLWVFAAGFALLLALAWFALRLTLNY 262
            +P+W   AGF +L    W  L L  +Y
Sbjct: 217 QMPVWSVFAGFIVL----WVGLFLGYSY 240