Pairwise Alignments

Query, 442 a.a., T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain from Variovorax sp. SCN45

Subject, 308 a.a., sodium-driven polar flagellar protein PomB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 2/138 (1%)

Query: 292 RLARFLEPEIKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAQSLPVLRRIGQALAEVK 351
           ++A+ L  EI  G + +     + ++R+R    F SGS     +  PV+R +G+ L +V 
Sbjct: 154 KMAQELNQEIADGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVP 213

Query: 352 GEVLITGHSDNQPIRSLRYPSNWHLSAARADAVKGALSTL--VDPARMRSDGKADAEPVA 409
           G + ++G++D+  I    Y SNW LS+ RA AV   L  +   DP RM+  G A   P+ 
Sbjct: 214 GIITVSGYTDDMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMKVVGMASNNPIV 273

Query: 410 ANDTPANRARNRRVDIVL 427
            ND+P NRARNRRV+I +
Sbjct: 274 PNDSPDNRARNRRVEIAI 291