Pairwise Alignments

Query, 330 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 225 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 178 LRAGGKLHGESNFDFVFPPFDSAEIRLRVRNLMSRSASIRCAATGNGVLAFKSYRFQLDE 237
           LRAGG        D++  PF  +E+ +R   LM R  S    A     L       +L  
Sbjct: 91  LRAGGD-------DYMTKPFAFSELLVRAEKLMQRGNS----APAQTELKVGELVMELLT 139

Query: 238 RKVFYEDREVSLQRREYDLALNFFKNIDFPLARGNLNFLLRREFSDSRSRVLDVYVAKIR 297
           RKV     E+ LQ +E+ L     ++ +  ++R  L   +     D R+ V+DV++AK+R
Sbjct: 140 RKVTLAGSEILLQPKEFQLLKYLMEHPNQVISRTLLFEAVWDYHFDPRTNVIDVHIAKLR 199

Query: 298 KKLRIEPSNGLILKAVFGYGYELR 321
           +K   E   G +++ V G GY LR
Sbjct: 200 RKFE-ELGFGELIETVRGAGYRLR 222