Pairwise Alignments

Query, 334 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 315 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  113 bits (282), Expect = 7e-30
 Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 2/288 (0%)

Query: 1   MNFTFKQLEAFLFSAKLQSFSAAAVKLHTTQSAISKRLAELEESLGGPLLHRTSHGLELA 60
           MN  F  LE F++ A+LQSFS  A K+ +TQ+AIS R+A LEE LG  L  R S G+ L 
Sbjct: 1   MNLKF--LETFVWVARLQSFSLTAEKMFSTQAAISSRIASLEEELGLRLFVRDSRGVSLT 58

Query: 61  QAGRELLSLAEEAQRLWQRIQHDISVDKTLRGTFRVGVTELIAMTWLTSLIQLLQKLHPE 120
             G ++L  AE+   + + ++  +      +G  R+GV + +  TWL+ L+ +L +  P 
Sbjct: 59  PEGLKVLDYAEQMLEVQRALKQSLDTTSAQQGLVRIGVMDTVIHTWLSPLMSMLMQAFPA 118

Query: 121 VTLEPVVDAGLTLFERLEANKLDLSIMPGIFWGQAFESIKVGQVDQAWIASPRLGVPNRA 180
           V +E   DA   L ++L+   LD+     +   ++  ++++G     WIA+ +       
Sbjct: 119 VEIEITADAARNLCDQLQKGYLDIVFQTDLVRHESVRNLELGHYPMHWIAASQSIYARPY 178

Query: 181 LKPHEFADYPVIEQPAGASKNRFYEAWRAEHGFRFGKVMLTNSTTVLRELTISGFGISQQ 240
               E A   +I     +  ++        HG    +V   NS + +  L   GFGI   
Sbjct: 179 ASLVEMAGERIITFVKHSRPHQDVLNLLYAHGVSAPRVSCVNSVSAMTRLIRDGFGIGAL 238

Query: 241 ALDYVRPDIKSGLLRIVRTDPMPPPLVYSAVYRRDNASPALARIVELA 288
               V   + SG L  +      P L   A +R       +  IV+++
Sbjct: 239 PAALVAKPLASGELIQLEPGTALPQLDVVASWRAGVGLELVENIVQMS 286