Pairwise Alignments

Query, 360 a.a., D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) from Variovorax sp. SCN45

Subject, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

 Score =  196 bits (497), Expect = 1e-54
 Identities = 126/362 (34%), Positives = 195/362 (53%), Gaps = 33/362 (9%)

Query: 1   MQKKHRIAVIPGDGIGVEVMPEGLRVLDAVGRRFGIDFSYDHFDWGSDHYVRTGLMMPAD 60
           M+   +I VI GDGIG EV+PE +RVL+ +G     DF + H   G + + R G  +P +
Sbjct: 1   MRNTPKICVINGDGIGNEVVPETVRVLNELG-----DFEFIHAHAGYECFKRCGDAIPEN 55

Query: 61  WADKIQGHDAIYFGAVGAPDKVP-DHIAVWGLLIKIRRDFDQYVNLRPVRLMPGVPGPLA 119
             +  +  D I FG+V  P      + +    ++ +R++ D Y N+RP            
Sbjct: 56  TIEIAKESDCILFGSVTTPKPTELKNKSYRSPILTLRKELDLYANIRPTYNFD------- 108

Query: 120 HRKPGDIDFLVVRENTEGEYTSVGGRLFEGTPREMAIQEAVFTRTGVDRIIDYAFTLANR 179
                ++DF+++RENTEG Y     + +     E+AI E + ++ G  RI+ +AF  A +
Sbjct: 109 -----NLDFVIIRENTEGLYVK---KEYYDEKNEVAIAERIISKFGSSRIVKFAFDYAVQ 160

Query: 180 RKRKSLTAATKSNGISITMPYWDERLAEIAKRYPD--VATNKFHIDILCAHFVQHPDWFD 237
             RK ++   K+N + +T   + E   E++K Y    + ++ + ID    + +++P  FD
Sbjct: 161 NNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFD 220

Query: 238 VVVASNLFGDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVHGSAPDIAGKGIANPI 297
           V+V +NLFGDILSD      G +G++PSAN+  +     LFEPVHGSAPDIAGKGI+NPI
Sbjct: 221 VLVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN---GLFEPVHGSAPDIAGKGISNPI 277

Query: 298 GQIWSAALMLDHLG-NDDPVYAQASAAVVSAIETVLSEGPRTRDMGGTANTVDVGRAIAD 356
             I SAA+MLDHL  N +  Y      +  A++  +     T D+GG   T +V   I +
Sbjct: 278 ATILSAAMMLDHLKMNKEAEY------IRKAVKKTVECKYLTPDLGGNLKTFEVTEKIIE 331

Query: 357 CI 358
            I
Sbjct: 332 SI 333