Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  223 bits (567), Expect = 6e-63
 Identities = 113/312 (36%), Positives = 196/312 (62%), Gaps = 9/312 (2%)

Query: 4   FLLKRTLTLIGTLVGASIIVFLVLEILPGNAAQMLMGPD---ASPEAVAALATKLGLDLP 60
           F L+R L +I T+V  ++++F++  ++PG  A  L       A P+ +A L  + GL+ P
Sbjct: 4   FTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGLNKP 63

Query: 61  AWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTA 120
              R+  ++  L   +LG S+    PV+DLI +R+  ++ LA+ AM F  VI++ +G  A
Sbjct: 64  LMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLGFVA 123

Query: 121 AARHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGVKS 180
           A R   + D   M  A  G+++P FW  +L++ +F+++L W  + G+   GDG F   ++
Sbjct: 124 ALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGY---GDGSF---RN 177

Query: 181 LLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVI 240
           L+LPA++L V   A+LAR TR+ VL+V+  DF+RTA +KG+S+  V+  HV RNA++ ++
Sbjct: 178 LILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIV 237

Query: 241 TVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAAMVVIVNFVV 300
           T +G+QF  L+   +V+E +F  PG+G L+  ++++RD+ VV+  ++++    +++N  V
Sbjct: 238 TTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAV 297

Query: 301 DVLYAVIDPRIK 312
           D++YA IDPRIK
Sbjct: 298 DLIYAAIDPRIK 309