Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 600 a.a., dipeptide ABC transporter permease and ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  197 bits (500), Expect = 6e-55
 Identities = 117/291 (40%), Positives = 165/291 (56%), Gaps = 3/291 (1%)

Query: 1   MNAITA-PAPSAAALKLPGFWQRAVKHRSFVIGGVLAALLLIAALVSFVWTPWSPYAMDM 59
           M+A+ A PAP   + ++   W   + +R    G VL  L+L+  ++  +     P A   
Sbjct: 1   MSALAASPAPRRGSGRITS-WHLLLNNRLATGGLVLLGLILLLIVLVPILPLPDPDATAP 59

Query: 60  ANKMQAP-TGSHWLGTDAFGRDVASLLLVGARASILVGIIAVGIGLVVGTALGLLAAAKR 118
            N++Q   T  H LGTD  GRD+ S LL G R SI VG  A  I   +G+A+G++A    
Sbjct: 60  VNRLQPVLTAGHLLGTDQLGRDILSRLLWGTRVSIAVGFAATLIAAGIGSAIGIIAGYAG 119

Query: 119 GWVEEAVMRLSDFTLAFPAILSAIMMTAVFGAGIVNAIVAIGIYNIPTFARITRASANAI 178
           G  + A+MR  D  +AFP IL A+ + A  G G++NA+ AI + NIP FAR  R      
Sbjct: 120 GRTDNAMMRGIDMLMAFPYILLALAIVAALGPGLMNALYAIALVNIPFFARNVRGVTLGY 179

Query: 179 WSREYVAAARACGKGSFAITMQHVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPP 238
              E+V AAR  GKG  ++ +  VLPN+  V+++ ++      IL  A LS+LGLG QPP
Sbjct: 180 AHSEFVDAARLSGKGHLSVILTEVLPNVMPVIVITMSTTAGWMILETAGLSFLGLGAQPP 239

Query: 239 QPSWGRMLSEAQTLMFQQPLLAVFPGMAIALAVLGLNLLGDGLRDLLDPRL 289
           Q   G ML E +  +F  P ++V PG  I L V+ LN+LGDG+RD+LDPRL
Sbjct: 240 QADLGSMLGEGRAQLFTAPHVSVVPGAMIFLIVISLNVLGDGIRDVLDPRL 290