Pairwise Alignments

Query, 271 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (566), Expect = 1e-62
 Identities = 118/254 (46%), Positives = 170/254 (66%), Gaps = 7/254 (2%)

Query: 12  LAVKNLYRHYALPREKLFGPPPTVKALNGVSFDVQAGKSMGIVGESGSGKSTIARLVMAL 71
           + VK L + Y + R   +      +A+ G+S +++ G+++GIVGESGSGKST+ R ++ L
Sbjct: 282 IRVKFLVKPYFISRRNQY-----FEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGL 336

Query: 72  DTPTSGTVSLEGRDLHSLSKEALRVARRDFQMVFQDPYGSLDPRQTVARIVAEPLEA-LA 130
             P++G ++ +G+D  +LS++     ++D QMVFQDPYGSL PR TV  I+ E L     
Sbjct: 337 -LPSTGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQP 395

Query: 131 ETSRAEQRERASEALSAVGLRTTDMDKYPHEFSGGQRQRIAIARALITRPKLIVADEPVS 190
             S+ E+ +RA  AL  V L    +++YPHEFSGGQRQRIAIARALI  P  I+ DEP S
Sbjct: 396 HISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTS 455

Query: 191 ALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDEVCVVFKGRIVERGRPADLF 250
           ALD SVQ  V+ L++++Q++  I YL ISHDLAVV  L D V V+ KG+++E+G    +F
Sbjct: 456 ALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIF 515

Query: 251 AHAQHEYTRTLLSA 264
            + QHEYT+ L++A
Sbjct: 516 HNPQHEYTKKLIAA 529



 Score =  173 bits (439), Expect = 6e-48
 Identities = 103/264 (39%), Positives = 151/264 (57%), Gaps = 15/264 (5%)

Query: 10  PLLAVKNLYRHYALPREKLFGPPPTVKALNGVSFDVQAGKSMGIVGESGSGKSTIARLVM 69
           PLL V+NL   +             V A+  VSFD++ G+++ IVGESGSGKS     +M
Sbjct: 5   PLLQVRNLSVSFTTN-------DGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALM 57

Query: 70  ALDTPTS-----GTVSLEGRDLHSLSKEALRVARRD-FQMVFQDPYGSLDPRQTVARIVA 123
            L    +      ++  EG +L + +   +R  R D   M+FQ+P  SL+P   V   VA
Sbjct: 58  QLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVA 117

Query: 124 EPLEALAETSRAEQRERASEALSAVGLRTTD--MDKYPHEFSGGQRQRIAIARALITRPK 181
           E +      S+ + ++R  E    V L        K+PHEFSGGQ QRI IA ALI  P 
Sbjct: 118 EAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPD 177

Query: 182 LIVADEPVSALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDEVCVVFKGRIV 241
           +++ADEP +ALDV+VQA+VL L++++Q   G++ L I+HDL VV  + D V V+ KG +V
Sbjct: 178 ILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVV 237

Query: 242 ERGRPADLFAHAQHEYTRTLLSAV 265
           E+G    LF   +H+YTR L++++
Sbjct: 238 EQGSTEQLFLQPEHDYTRMLINSI 261