Pairwise Alignments

Query, 271 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  232 bits (591), Expect = 2e-65
 Identities = 127/267 (47%), Positives = 175/267 (65%), Gaps = 12/267 (4%)

Query: 1   MSQPTTAGQPLLAVKNLYRHYALPREKLFGPPPTVKALNGVSFDVQAGKSMGIVGESGSG 60
           M +P    +PLL+V+++ + Y            + +AL G+SFD+  G++M +VGESGSG
Sbjct: 265 MHEPGARAEPLLSVRDVRKTYG-----------SFEALKGISFDLMPGETMAVVGESGSG 313

Query: 61  KSTIARLVMALDTPTSGTVSLEGRDLHSLSKEALRVARRDFQMVFQDPYGSLDPRQTVAR 120
           KST+AR ++ LD P SGT   +GRDL +LS   L   RRD QMVFQDP  SL+PR TV +
Sbjct: 314 KSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQ 373

Query: 121 IVAEPLEALAET-SRAEQRERASEALSAVGLRTTDMDKYPHEFSGGQRQRIAIARALITR 179
           +++E      +   +A+ RER +E L  VGL    M +YPH+FSGGQRQRIAIARAL   
Sbjct: 374 LISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALE 433

Query: 180 PKLIVADEPVSALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDEVCVVFKGR 239
           P+LI+ DE VSALDVSVQAQV+ L+  L+++ GI+++ I+HDL VV    D V V+ +G 
Sbjct: 434 PQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGE 493

Query: 240 IVERGRPADLFAHAQHEYTRTLLSAVL 266
           +VE G   ++F   +  YTR LL+A L
Sbjct: 494 VVELGTVREVFDTPRQAYTRALLAASL 520



 Score =  179 bits (455), Expect = 9e-50
 Identities = 103/238 (43%), Positives = 154/238 (64%), Gaps = 9/238 (3%)

Query: 35  VKALNGVSFDVQAGKSMGIVGESGSGKSTIARLVMAL-DTP----TSGTVSLEGRDLHSL 89
           V A+  +S+ +  G+++ I+GESGSGKS  +  +M L D P    +SG + L+GRDL ++
Sbjct: 22  VHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISSGEILLDGRDLLTM 81

Query: 90  SKEALR-VARRDFQMVFQDPYGSLDPRQTVARIVAEPLEALAETSRAEQRERASEALSAV 148
             E  R V  R   M+FQDP   L+P  +V   ++E +      + ++ RE A   L  V
Sbjct: 82  PAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHG-LAGSKAREEALRLLRRV 140

Query: 149 GLRTTD--MDKYPHEFSGGQRQRIAIARALITRPKLIVADEPVSALDVSVQAQVLNLMQD 206
           G+   +  M KYPHEFSGGQRQR+ IA AL  RP L++ADEP +ALDV+VQA+VL L+++
Sbjct: 141 GIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKE 200

Query: 207 LQQQFGISYLLISHDLAVVNHLCDEVCVVFKGRIVERGRPADLFAHAQHEYTRTLLSA 264
           LQ++ G++ L+I+HDL VV+ + D V V+ KG IVE G   +++ + QH YT+ L++A
Sbjct: 201 LQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREIYKNPQHPYTQKLIAA 258