Pairwise Alignments

Query, 271 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  238 bits (607), Expect = 2e-67
 Identities = 122/259 (47%), Positives = 171/259 (66%), Gaps = 2/259 (0%)

Query: 7   AGQPLLAVKNLYRHYALPREKLFGPPPTVKALNGVSFDVQAGKSMGIVGESGSGKSTIAR 66
           AG+P+L VKN+ + Y L     F  P  + A+  +SFDV AG+++GIVGESGSGKST+AR
Sbjct: 276 AGKPILEVKNIDKFYTLS-SGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVAR 334

Query: 67  LVMALDTPTSGTVSLEGRDLHSLSKEALRVARRDFQMVFQDPYGSLDPRQTVARIVAEPL 126
           +++ L+  + G     GRD+  + ++ L   RR  QMVFQDPY S++PR TV  IV+EP 
Sbjct: 335 VLLGLNEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPW 394

Query: 127 EALAET-SRAEQRERASEALSAVGLRTTDMDKYPHEFSGGQRQRIAIARALITRPKLIVA 185
               +   +   R+R +E L  VGL      +YPH+FSGGQRQRIAIARAL   P+L+V 
Sbjct: 395 RIHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVC 454

Query: 186 DEPVSALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDEVCVVFKGRIVERGR 245
           DE VSALDVSVQ QV++L+ +L+ + G++Y+ I+HDL +V H  D + V+  G IVE   
Sbjct: 455 DEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHAT 514

Query: 246 PADLFAHAQHEYTRTLLSA 264
             ++F + QH YTR L++A
Sbjct: 515 TEEIFRNPQHAYTRQLINA 533



 Score =  198 bits (503), Expect = 2e-55
 Identities = 112/244 (45%), Positives = 157/244 (64%), Gaps = 8/244 (3%)

Query: 36  KALNGVSFDVQAGKSMGIVGESGSGKSTIARLVMAL-DTPT----SGTVSLEGRDLHSLS 90
           +A +GVSF V AG+++ I+GESGSGKS  A  +M L DTP     +G+V+  GRDL SLS
Sbjct: 24  RATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDLSSLS 83

Query: 91  KEALR-VARRDFQMVFQDPYGSLDPRQTVARIVAEPLEALAETSRAEQRERASEALSAVG 149
           +   R +  R   M+FQDP   L+P  T+   + E        S AE R+RA E L  VG
Sbjct: 84  EGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAIEILGRVG 143

Query: 150 LRTTD--MDKYPHEFSGGQRQRIAIARALITRPKLIVADEPVSALDVSVQAQVLNLMQDL 207
           +   +  +D+YPH+FSGGQRQRI I  A+  RP++++ADEP +ALDVSVQAQ+L L++ L
Sbjct: 144 IPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQILELLKKL 203

Query: 208 QQQFGISYLLISHDLAVVNHLCDEVCVVFKGRIVERGRPADLFAHAQHEYTRTLLSAVLH 267
           Q + G++ ++I+HDL V  ++ D V V+  GRIVE G    +F +  H YTRTL++A+ H
Sbjct: 204 QAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVFENPAHSYTRTLINALPH 263

Query: 268 TPSR 271
              R
Sbjct: 264 ADDR 267