Pairwise Alignments

Query, 108 a.a., Integration host factor beta subunit from Variovorax sp. SCN45

Subject, 90 a.a., DNA-binding protein HU-beta from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 7e-20
 Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 1  MTRSDLVEELAARFAQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSVNRRPPRI 60
          M ++ LVE++AA  A ++   A  A+   ++A+S  L  G ++ + GFG+FSV  R  R 
Sbjct: 1  MNKTQLVEQIAAN-ADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAART 59

Query: 61 GRNPRSGESVQIPEKRVPHFKPGKALREA 89
          GRNP++GE ++I E +VP FK GKAL++A
Sbjct: 60 GRNPKTGEEIKIAEAKVPSFKAGKALKDA 88