Pairwise Alignments

Query, 108 a.a., Integration host factor beta subunit from Variovorax sp. SCN45

Subject, 90 a.a., DNA-binding protein HU-alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 71.6 bits (174), Expect = 2e-18
 Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 1  MTRSDLVEELAARFAQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSVNRRPPRI 60
          M ++ L++ +A + A LT   A+ A++  L A+  AL  G ++++ GFG+F VN R  R 
Sbjct: 1  MNKTQLIDFIAEK-ADLTKVQAKAALEATLGAVEGALKDGDQVQLIGFGTFKVNHRSART 59

Query: 61 GRNPRSGESVQIPEKRVPHFKPGKALREAV 90
          GRNP++GE ++I    VP F  GKAL++A+
Sbjct: 60 GRNPKTGEEIKIAAANVPAFVAGKALKDAI 89