Pairwise Alignments

Query, 982 a.a., Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B from Variovorax sp. SCN45

Subject, 674 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  181 bits (458), Expect = 2e-49
 Identities = 164/560 (29%), Positives = 261/560 (46%), Gaps = 64/560 (11%)

Query: 14  SVLAAL--MPSNARNRES-----TLAG-----LVALGCAIQTAWLFPQIAHGNVLRQEIQ 61
           +VLAAL  +   A NR+S     TL G     L  LG A+    + P       +  ++ 
Sbjct: 12  AVLAALPVLTLLAGNRKSLAGSITLVGVGVACLAMLGLAVTALTVGP-------IAFDLG 64

Query: 62  WLPALGL--NLVFRMDGFAWLFCMLVLGIGALVVLYARYYMS--ASDPVPRFFSFFLAFM 117
            +P  GL  +L F +DG + +F +L+  +G    LY+  Y++    +   R++  F  F+
Sbjct: 65  TVPLFGLTSSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHYPDEDARRYYVPFPLFI 124

Query: 118 GAMMGVVLSGNLIQMVLFWELTSLFSFLLIGYWHHRRDARRGARMALTVTGAGGLCLLAG 177
             M+ V  + +       WE  +L S+ L+ + +  ++      +   +T    + L+  
Sbjct: 125 AGMLMVATTSDWFCFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMGLMLA 184

Query: 178 VLVLGRIVGSYELDVVLASGDLIRAH---ALYPVALVLILLGAFTKSAQFPFHFWLPRAM 234
           ++VLG   GS     V  +   ++A    ALY + L L  +G  TK+  FP   WLP+A 
Sbjct: 185 IIVLGTWGGSTSFAAVAKTLGALQAENPVALYGL-LSLFFIGFATKAGMFPLGIWLPKAH 243

Query: 235 -AAPTPVSAYLHSATMVKLGVFLMAR--LW--PVLSGTEQWFWLVGGAGAITLLLGGFIA 289
            AAP  VSA L S  M+KLG++ M R  LW  P+   T  W  ++   G +++L+G   A
Sbjct: 244 PAAPASVSALL-SGVMIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVGTLRA 302

Query: 290 MFQRDLKALLAYSTISHLGLITLLLGL------NSPLAA----VAAVFHVMNHATFKASL 339
           + + D K LLA  +I  +G + L LGL      ++PL A    +  ++H++NHA FK+ L
Sbjct: 303 LGEHDCKRLLAQHSIGQMGYVLLGLGLGLTFLGSNPLFAALGFLGCLYHLINHACFKSLL 362

Query: 340 FMAAGIIDHETGTRDIRKLSGLMRLMPITGTLAIIASASMAGVPLLNGFLSKEMFFAETV 399
           F   G I +  GTRD+  L GL  +MP+T   A++ + S+AG P  NGF+SK + +   +
Sbjct: 363 FFNTGSILYRAGTRDLDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLYQSAI 422

Query: 400 FIQATPWVDFSLPVIATIAGIFSVAYSARFVFDVFFGPPCGDEVPKH----PHEPPHWMR 455
           F   +  V     V+A   G  ++A   +++   + G      +PK         P  M 
Sbjct: 423 FGDVSTPVYILAAVVAIFIGTVTLASFVKYMGTAYLG-----TLPKRFVGSGFGCPRSME 477

Query: 456 VPVELLVLLCLVVGVAPAWSVG-------PMLAAAAT---PVVGGTLPEYSLAVW--HGF 503
                L ++CLV+GV P   V        P  A A     P V   LP   L+V    G 
Sbjct: 478 AVEVFLAVVCLVMGVFPGPVVATLLGVLDPAFAGAGVDLGPSVLSALPWSGLSVTSASGT 537

Query: 504 NLPLLMSFVALAGGAALYLL 523
            L +    V + G A  + L
Sbjct: 538 TLTVFAPLVVIGGLAVSFAL 557