Pairwise Alignments

Query, 572 a.a., Na(+) H(+) antiporter subunit D from Variovorax sp. SCN45

Subject, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

 Score =  243 bits (621), Expect = 1e-68
 Identities = 170/541 (31%), Positives = 265/541 (48%), Gaps = 61/541 (11%)

Query: 20  VAVPILVPMLTAALMLLLGENRRRTKSFLSVVSGLVGLLAALALLRWVNAPETGGGPGSI 79
           + +P+++ +LTA  + L G NR  T   LSV+  ++ L     L   +       GP SI
Sbjct: 6   LTLPVVISLLTAVAIFLAGRNRWLTNG-LSVICSVINLFTGALLTITIYTH----GPASI 60

Query: 80  GVYLPGNWRAPFGIVLVADRLSTMMVALTGVVAFAASIYSTSRWDR--AGVHFHPLLQLQ 137
                G W APFGIV VAD LS  MV +T ++   + IY+ +      +   +H LL + 
Sbjct: 61  AF---GQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVL 117

Query: 138 LMGLNGAFLTGDLFNLFVFFEVMLAASYGLLLHGSGRLRVQAGLHYIAINLAASSLFLIG 197
           L G+ GAFLTGD+FNL+V+FEVML AS+GL++  + + ++   + Y+ +NL ++ +FL+ 
Sbjct: 118 LAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLS 177

Query: 198 AAILYGVTGTLNMADLGMRIAELAPGDRGLVHAATAILFTAFFAKAGAWPLNFWLVPAYS 257
             +LYG TGTLN+ADL  +   LAP  + ++     +L  AF  KA  +PL  WL  +Y 
Sbjct: 178 IGLLYGATGTLNLADLHDKAQSLAPEMKTML---AGLLLFAFSIKAALFPLFAWLPASYH 234

Query: 258 SAVSPVGAVF-ALLTKLGVYTVLRLWTVLFAPDTGASAAFGQPVLVGAGIATLFVAAFGI 316
           +  S + A+F ALLTK+GVY +LR++T++F  D     +  QPVL+G    T+     G 
Sbjct: 235 TLPSAIVALFAALLTKVGVYALLRVFTLVFPLD----GSGWQPVLLGIAALTMLTGVLGA 290

Query: 317 VGTQRLSNLAGFSVLISAGTLLAAVGLGQPAVWAGALFYMLSSTLAVSAFFLLIDMIERW 376
                +  +  F ++   G ++  + +  P    GA+FY++   L     FL+  +I R 
Sbjct: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGR- 349

Query: 377 RNAGMSVAPHEAAGTAPFLAEDLSALSDVNLDDDAQALYGRAIPAGVAFLGLSFLICTLL 436
                            +    L+ L  V           RA+P    +L   FL+    
Sbjct: 350 ----------------KYGTTQLTQLGGVY----------RAMP----WLTFGFLLAAFS 379

Query: 437 LTGLPPLSGFVGKFAMLTGLMGVNGAIGAAGWTFLVLLIASGFLALIALTRTGIRHFWTQ 496
           L G PPLSGF GKF +      +  ++ A  +    + +  G L + ++T+     FW  
Sbjct: 380 LAGFPPLSGFWGKFLV------IKASLAAELYWLAAIALLVGLLTIFSMTKIWNEVFWKD 433

Query: 497 PHGNLP------SLPALEVLPVAGLIATCIALTVWAEPVLRHAMATAEGLRTPTAYRAAV 550
               L       S   L  LP+  L    + + + A+P  + A   AE L TPTAY  AV
Sbjct: 434 APAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAAEQLLTPTAYIHAV 493

Query: 551 M 551
           +
Sbjct: 494 L 494