Pairwise Alignments

Query, 572 a.a., Na(+) H(+) antiporter subunit D from Variovorax sp. SCN45

Subject, 1265 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  112 bits (281), Expect = 7e-29
 Identities = 119/466 (25%), Positives = 198/466 (42%), Gaps = 61/466 (13%)

Query: 93  IVLVADRLST-----MMVALTGVVAFAASIYSTSRWDRA-GVH-FHPLLQLQLMGLNGAF 145
           + LVA RL +     +   +   +  A ++YS        GV+ +   L L +  L G  
Sbjct: 266 LALVAARLESGDLGGLFALIFAAIGLAVTVYSVGYMKHGHGVNRYFFFLFLMIGSLIGVA 325

Query: 146 LTGDLFNLFVFFEVMLAASYGLLLHGSGRLRVQAGLHYIAINLAASSLFLIGAAILYGVT 205
            T  L N ++F+E+M   SY L++H      ++AG+ Y  I  + + +   G  +L+   
Sbjct: 326 TTNHLGNFYLFWELMTWMSYLLVIHEQTAKALKAGMKYFLICASGAYVMHFGILVLHAQL 385

Query: 206 GTLNMADLGMRIAELAPGDRGLVHAATAILFTAFFAKAGAWPLNFWLVPAYSSAVSPV-G 264
           GT  ++++   I  L+P   G+V A   I    F AKAG +PL  WL  A+  A S + G
Sbjct: 386 GTFEISEIAPCIGTLSPALAGVVLATFLI---GFMAKAGLFPLYSWLPEAHPVAPSSISG 442

Query: 265 AVFALLTKLGVYTVLRLWTVLFAPDTGASAAFG--------QPVLVGAGIATLFVAAFGI 316
            +  +LTK G+  +++L   +F    GA   FG          VLV  G  TL +     
Sbjct: 443 PMSGILTKAGILGMVKLLFGIFG--VGALGQFGLFAGLSLPGAVLVALGGITLLLGEVQA 500

Query: 317 VGTQRLSNLAGFSVLISAGTLLAAVGLGQPAVWAGALFYMLSSTLAVSAFFLLIDMIERW 376
                +  L  +S L   G +   +G+G     AG LF++ +  +  +  F  +  +   
Sbjct: 501 YRQTDIKRLLAYSTLAQIGEITMVLGVGTSLALAGGLFHVTNHAVMKTMLFFAVGAL-IL 559

Query: 377 RNAGMSVAPHEAAGTAPFLAEDLSALSDVNLDDDAQALYGRAIPAGVAFLGLSFLICTLL 436
           R+AG S+             +DL  L             G+ +P    F GL   I  L 
Sbjct: 560 RSAGRSL-------------DDLKGL-------------GKVMP----FTGLCLGIGLLA 589

Query: 437 LTGLPPLSGFVGKFAMLTGLMGVNGAIGAAGWTFLVLLIASGFLALIALTRTGIRHFWTQ 496
           + G+PP  GFV KF M+   +   G +G A    +  +I + + A +      +R  + +
Sbjct: 590 IMGVPPFGGFVSKFLMIYACVEA-GQVGVAAVILVGSVIGALYYARV------LRAVFFE 642

Query: 497 PHGNLPSLPALEVLPVA-GLIATCIALT-VWAEPVLRHAMATAEGL 540
           P+     + A   + +A G +A  +  T V+ +  L   M   E L
Sbjct: 643 PYTGPKVVEAPLTMRIALGALAGVVVFTGVYPDAALSVVMPVVETL 688



 Score = 87.0 bits (214), Expect = 4e-21
 Identities = 101/369 (27%), Positives = 150/369 (40%), Gaps = 45/369 (12%)

Query: 98   DRLSTMMVALTGVVAFAASIYSTSRW--DRAGVHFHPLLQLQLMGLNGAFLTGDLFNLFV 155
            D LS    AL  VV     +YS        A   F     + + GL G   + DLFN F 
Sbjct: 754  DLLSFWFAALIVVVGAINLLYSIGYMAHGHAQNRFFFFFVMMIGGLLGVTASDDLFNFFA 813

Query: 156  FFEVMLAAS-YGLLLHGSGRLRVQAGLHYIAINLAASSLFLIGAAILYGVTGTLNMADLG 214
            F+EVM + + Y +++H   +  +  G  Y   N   +S   +G AIL    GT  MA L 
Sbjct: 814  FWEVMSSWTLYLVIIHEETKDSLDEGTKYFIFNFVGASFLFLGVAILAAKAGTFEMALLP 873

Query: 215  MRIAELAPGDRGLVHAATAILFTAFFAKAGAWPLNFWLVPAYSSAVSPV-GAVFALLTKL 273
                 +     G +  +  ++      KA   PL        + A +PV G + A+L K+
Sbjct: 874  QAALSMPV---GWLAVSAGLILAGLLMKAAQLPLRIDYQMHPAPAPTPVSGYISAVLLKV 930

Query: 274  GVYTVLRLWTVL-----FAPDTGASAAFGQPVLVGAGIATLFVAAFGIVGTQR--LSNLA 326
            G Y VL++   L      A   G  A    P++V   IA L V   G +   +  +  L 
Sbjct: 931  GPYGVLKIMVALGAGGGLARIAGLGAWMPDPLVVVQVIAALTVLYAGAMAVVQNGVKRLL 990

Query: 327  GFSVLISAGTLLAAVGLGQPAVWAGALFYMLSSTLAVSAFFLLIDMIERWRNAGMSVAPH 386
             +S +   G +L  + LG     AG L + ++  +     FL                  
Sbjct: 991  IYSTVSQLGYVLLGLSLGSALGVAGGLMHFVNHMMLKDILFL------------------ 1032

Query: 387  EAAGTAPFLAEDLSALSDVNLDDDAQALYGRAIPAGVAFLGLSFLICTLLLTGLPPLSGF 446
             AAG        + A + V+  DD   L GR +P  + F GL FL   L L+G+PP +GF
Sbjct: 1033 -AAGC-------ILAQAHVHSLDDLGGL-GRKMP--ITF-GL-FLFAGLSLSGIPPFNGF 1079

Query: 447  VGKFAMLTG 455
              K+ +  G
Sbjct: 1080 ASKWLIYQG 1088