Pairwise Alignments

Query, 267 a.a., Hydroxymethylpyrimidine ABC transporter, ATPase component from Variovorax sp. SCN45

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  169 bits (429), Expect = 1e-46
 Identities = 92/225 (40%), Positives = 140/225 (62%), Gaps = 6/225 (2%)

Query: 33  EFLAVSDVTMDVDAGDMISLVGPSGCGKSTLLKILSGLHGHDGGTLEIGGPDGHGFNAGR 92
           +++A+ DV++++  G+ ISL+G SGCGKSTLL +++GL     G + + G        G 
Sbjct: 21  QYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSGGIILEGRQVT--EPGP 78

Query: 93  DVGMVFQQPLLLKWRTILDNVLLPADILGLERRAATQRA--HELLEMVGLAGFADKLPYE 150
           D  +VFQ   LL WRT+  N+ L  D +  +R    +R    E +++VGL   ADK P+E
Sbjct: 79  DRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRTIIEETIDLVGLRAAADKYPHE 138

Query: 151 LSGGMQQRAAIARALIHDPKLVLMDEPFGALDALTREKMNLEMLRIWEQSRKTFIVVTHS 210
           +SGGM+QR AIAR L   PKL+L+DEPFGALDALTR  +  +++RI +++  T ++VTH 
Sbjct: 139 ISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLMRICQEAGVTAVMVTHD 198

Query: 211 IQEAVFLGSHCAVLTAGP-ARMADFFRIDLPEPR-KLHVKTSPEF 253
           + EA+ L     +LT GP A++     +D P PR +L +  +P +
Sbjct: 199 VDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMMETPHY 243