Pairwise Alignments

Query, 300 a.a., Carbon monoxide oxidation accessory protein CoxD from Variovorax sp. SCN45

Subject, 309 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  296 bits (757), Expect = 5e-85
 Identities = 150/282 (53%), Positives = 202/282 (71%), Gaps = 7/282 (2%)

Query: 5   TIDSLSDGLMQAGYFADRRLATAVFLALKLQRPLLLEGEPGVGKTELAKALSKALSRELL 64
           +ID     L    Y A   LAT +FLAL+++RPL LEGE GVGKTE+AK L++AL R L+
Sbjct: 12  SIDETRAMLEAQDYLAGTALATVLFLALRMKRPLFLEGEAGVGKTEIAKVLARALDRPLI 71

Query: 65  RLQCYDGLEQREALYEWNYAAQLLHMRAAEATGAA--RDVEAEVYQPHYLIRRPLLQALQ 122
           RLQCY+GL+   A+YEWNY AQ+L +R +EA G    + VE++++   +LIRRP+LQA+ 
Sbjct: 72  RLQCYEGLDVASAVYEWNYPAQMLEIRLSEAAGTVDRQRVESDIFSERFLIRRPVLQAIS 131

Query: 123 TPLPGA-VLLIDEVDRADEPFEAFLLEYLGEYQVSIPELGTVRAVVPPVTILTSNRTREL 181
           T    A V LIDE+DR DE FEAFLLE L ++QV+IPELGT++A  PP+ I+T+NRTRE+
Sbjct: 132 TTAGRAPVFLIDELDRTDEAFEAFLLEVLSDFQVTIPELGTIKADEPPIVIITTNRTREI 191

Query: 182 NDAVKRRCLYHWLDYPERERELAIVRAQVPQAGEKLSAQVSAFVARLRQAPFADAFQRAP 241
           +DA+KRRCLYHW+DYP+  +EL I+R +VP     LS ++ A+V RLR     D F+  P
Sbjct: 192 HDALKRRCLYHWVDYPKAAQELEIIRRKVPGCNAALSREIVAYVQRLRA---LDLFKN-P 247

Query: 242 GIAESVEWARALIALDTVELDPEVVVDTAGILFKQRDDVAAL 283
           G+AE+++WA AL  LD + LDPE V DT G L K +DD+A +
Sbjct: 248 GVAETIDWATALTELDALALDPETVADTLGTLLKYQDDIARI 289