Pairwise Alignments

Query, 380 a.a., Transcriptional activator of acetoin/glycerol metabolism from Variovorax sp. SCN45

Subject, 628 a.a., Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 5/246 (2%)

Query: 40  SWISRSWQRCIEAGRRPQQRVSFDPVSQSAGLDVAERNRVLVEAARP-VIERLSRAIADT 98
           +W++ SWQR + AG    +      +++S      E+ + L+E  +   +   ++ +A +
Sbjct: 21  AWLTDSWQRSLGAGLSEFRAGEDLRLTRSELKYKHEQYQQLIELVQSHALPLFNQLMAHS 80

Query: 99  RYFAILTDADGIVVDVGNLPDGTDAASRYARDIGRVGVDLSESAIGTSAIGTALAEHESV 158
               +L+DADG V+    +   +   +  A DIG   V+  E   GT+AIGTAL   ++V
Sbjct: 81  NSRLLLSDADGYVLKHWGVSRYSSKLADVALDIG---VNWLEKYKGTNAIGTALTAKQAV 137

Query: 159 WLHRGEHFFDDTSVYSCAGAPLFGPRGDCIGMLDLTGVQVVERPELRHLATLSARSIENM 218
            +   +HF       SC   P+F P+G+ +G+LD+T  Q     +   L +  A+ +E  
Sbjct: 138 SVVGEQHFIRQNRFMSCTACPIFSPQGEMLGVLDITSEQQRHSQQTLMLVSSLAQQVETA 197

Query: 219 LVLREP-CELLLRLAWPGSTASEATEGLLCIDGEGYVTGANAAARQMLHQPLARNEHALH 277
           L+   P     +  A   S  +   +G++    +G + G N  A+Q+L Q    +    H
Sbjct: 198 LLCHLPDSHYRIDFAAQPSLLNSGWQGIVIASSDGRIVGCNPMAKQLLSQAKLGDSLDQH 257

Query: 278 FNDLFA 283
             D +A
Sbjct: 258 LGDNWA 263



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 13/21 (61%), Positives = 17/21 (80%)

Query: 350 GNVAEAARALGISRATVYRKL 370
           GNV++ A+ LGISR  +YRKL
Sbjct: 601 GNVSQCAKRLGISRNALYRKL 621