Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  137 bits (344), Expect = 7e-37
 Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 13/298 (4%)

Query: 4   QQLVNALSLGCVYALFALGFTLIFGVLGVINLSHGAVFMVGAYAA--------AEFMRVS 55
           Q +   LSLG V  L A+G  + FGV+G+IN++HG + M+GAY            F  + 
Sbjct: 243 QNIWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLF 302

Query: 56  GMPLWVGLPFAFAFCGVLGFLVDVLVLKPLRKRNAPHLIPMIATIGVAIILNNGIQGIFG 115
              L + LP AF   G +G  ++  V++ L  R    L  ++AT G+++IL   ++ IFG
Sbjct: 303 EWSLAIALPLAFLVTGAVGLALERGVIRFLYGRP---LETLLATWGISLILQQTVRTIFG 359

Query: 116 AENLRFPPGTIPDDALVFAGIHVTVLELGIVLASFVLMGVLMLSLQRTQLGRALRAIAES 175
             N      +    A    G+ +T   L I++ +  +   L+  L++T +G  +RA+ ++
Sbjct: 360 PTNREVGNPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQN 419

Query: 176 PKAAYLVGVNVEGLFYLTSFVAAGLGGVAGVLIGLYSNALFPLMGQPMLEKGIAVIILGG 235
            + A  +G+    +  LT  + +G+ G+AGV +    N + P +GQ  +     V++ GG
Sbjct: 420 RRMASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDN-VSPNLGQGYIIDSFMVVVFGG 478

Query: 236 MGDIRGALLGGLFLGFAEVLSVAYVGSNMRDAVAFGLLFLVLLVRPKGLFGSLKERKV 293
           +G++ G L+G   LG        Y G+ +   +   L+ L +  RP+GLF +LK R V
Sbjct: 479 VGNLWGTLVGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRGLF-ALKGRAV 535