Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 295 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (392), Expect = 1e-42
 Identities = 105/288 (36%), Positives = 160/288 (55%), Gaps = 8/288 (2%)

Query: 1   VLDQQLVNALSLGCVYALFALGFTLIFGVLGVINLSHGAVFMVGAYAAAEFMRVSGMPLW 60
           VL  Q++  L  G  YA+ +LG  LIFG+L +IN +HGA +M+GA+ +   +R+ G+  W
Sbjct: 11  VLWGQVLIGLINGSFYAVLSLGLALIFGLLNIINFTHGAFYMLGAFVSWWLLRILGIGYW 70

Query: 61  VGLPFAFAFCGVLGFLVDVLVLKPLRKRNAPHLIPMIATIGVAIILNNGIQGIFGAENLR 120
             L  A    G+ G +++ L+LKPL K +  HL  ++ T G+A+IL   ++  +G   L 
Sbjct: 71  PALILAPLAVGLFGIVLERLLLKPLYKLD--HLYGLLLTFGLALILEGALRQGYGVSGLP 128

Query: 121 FPPGTIPDDALVFAGIHVTVLELGIVLASFVLMGVLMLSLQRTQLGRALRAIAESPKAAY 180
           +        A     + + V    +VLAS V+  V+ L +++T+ G  +RA  E+P    
Sbjct: 129 YAIPPSLQGAWNLGFMFLPVYRGWVVLASAVVCLVVWLLIEKTRAGAVMRAATENPTLVK 188

Query: 181 LVGVNVEGLFYLTSFVAAGLGGVAGVLIG-LYSNALFPLMGQPMLEKGIAVIILGGMGDI 239
             G+NV  L   T  + A L   AGVL   +YS  + PLMG  ++    AV+++GGMG I
Sbjct: 189 AFGINVPLLVTATYGLGAALAAFAGVLAAPIYS--VNPLMGSNLIIVVFAVVVIGGMGSI 246

Query: 240 RGALLGGLFLGFAEVLS-VAYVGSNMRDAVAFGLLFLVLLVRPKGLFG 286
            GA+L G  LG  E L+ V Y  ++    V F ++ LVLLV+P GLFG
Sbjct: 247 LGAVLTGFALGVIEGLTKVVYPEASA--TVVFVIMALVLLVKPAGLFG 292