Pairwise Alignments

Query, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

Subject, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  216 bits (550), Expect = 5e-61
 Identities = 126/262 (48%), Positives = 164/262 (62%), Gaps = 3/262 (1%)

Query: 46  DAMRYAVLDGGKRLRPLLVLAASEAVGGNKAAALRAACATELIHAYSLVHDDLPCMDNDV 105
           +AMRY +L GGKR RP LV    + +G   +     A A E IHAYSL+HDDLP MD+D 
Sbjct: 32  EAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDE 91

Query: 106 LRRGKPTVHVKFGEADALLAGDALQALAFELLTPEDDEIPAATQAL-LCRLLARAAGSQG 164
           LRRGKPT H++F EA A+L GDALQ LAF +L   D      TQ + + + LA A+G+QG
Sbjct: 92  LRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQG 151

Query: 165 MAGGQAIDLASVGIALDETRLREMHRLKTGALLQGSVEMGA-ACGSVTPDALAALRDYGA 223
           M  GQA+DLA+    +    L  +HR KTGAL++ ++ +GA A G      L  L  Y  
Sbjct: 152 MCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAE 211

Query: 224 AIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGLDGARAQARQLLADALAA 283
           A+GLAFQV DDILD+ +D++TLGK  G D   +K TY +LLGL+GA+ +A  LL +AL A
Sbjct: 212 AVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEALLA 271

Query: 284 LEKSGLADTSALRALAHMVVDR 305
           LE     +T  L   A  VV+R
Sbjct: 272 LEAIPY-NTEHLEEFARYVVER 292