Pairwise Alignments

Query, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

Subject, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (298), Expect = 9e-32
 Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 28/301 (9%)

Query: 13  DAKTLAAWCDPHLANVESALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVG 72
           D K + A     +A V   +   +  D   L+     Y +  GGKRLRPLL + +++A+G
Sbjct: 2   DFKAIQALTANDMAKVNETIHAQLNSDVS-LINQLGFYIISGGGKRLRPLLAVLSAKALG 60

Query: 73  GNKAAALRAACATELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQAL 132
              +    AA   E IH  +L+HDD+  +D   LRRGK T +  FG A ++L GD +   
Sbjct: 61  YQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTR 118

Query: 133 AFELLTPEDDEIPAATQALLCRLLARAAGSQGMAGGQAIDLASVGIALDETRLREMHRL- 191
           +F+++T             + +L++ A     +A G+   L +     D T    M  + 
Sbjct: 119 SFQMMTE-------LGSMKILKLMSDAVNV--IAEGEVQQLMNCNDP-DTTEASYMQVIY 168

Query: 192 -KTGALLQGSVEMGAACGSVTPDALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAG 250
            KT  L + + ++GA     +P+   A+++YG  +G AFQ++DD++D T+D   +GK  G
Sbjct: 169 SKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVG 228

Query: 251 KDAAADKPTYVSLLGLDGARAQARQLLADA-------------LAALEKSGLADTSALRA 297
            D A  KPT   L  +     +   ++ +A             LAA+E++G    +  +A
Sbjct: 229 DDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKA 288

Query: 298 L 298
           L
Sbjct: 289 L 289