Pairwise Alignments

Query, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

Subject, 322 a.a., Trans-hexaprenyltranstransferase from Pseudomonas syringae pv. syringae B728a

 Score =  120 bits (300), Expect = 6e-32
 Identities = 84/249 (33%), Positives = 134/249 (53%), Gaps = 17/249 (6%)

Query: 50  YAVLDGGKRLRPLLVLAASEAVGGNKAAALRAACATELIHAYSLVHDDLPCMDNDVLRRG 109
           Y    GGKRLRPLLVL   +A+G         A   E +H  +L+HDD+  +D   +RRG
Sbjct: 38  YITSAGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDV--VDMSGMRRG 95

Query: 110 KPTVHVKFGEADALLAGDALQALAFELLTPEDDEIPAATQALLCRLLARAAGSQGMAGGQ 169
           + T +  +G A ++L GD L + +FE++     E+ +     + ++L++A  ++ +A G+
Sbjct: 96  RSTANALWGNAPSVLVGDFLYSRSFEMMV----ELGSME---VMKILSKA--TRIIAEGE 146

Query: 170 AIDLASVGIA-LDETRLREMHRLKTGALLQGSVEMGAACGSVTPDALAALRDYGAAIGLA 228
            + L+ +  A   E    E+ R KT  L + S    AA  +   +   ALR +G  +G+A
Sbjct: 147 VLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVA 206

Query: 229 FQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGL-DGARAQARQLLADALAALEKS 287
           FQ+VDD+LD   D++TLGK  G D A  KPT   +  + +G+  QA    A    A++K 
Sbjct: 207 FQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA----ALVRQAIQKG 262

Query: 288 GLADTSALR 296
           GL D  ++R
Sbjct: 263 GLEDLESIR 271