Pairwise Alignments

Query, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

Subject, 305 a.a., Polyprenyl synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  227 bits (579), Expect = 2e-64
 Identities = 132/264 (50%), Positives = 165/264 (62%), Gaps = 5/264 (1%)

Query: 46  DAMRYAVLDGGKRLRPLLVLAASEAVGGNKAAALRAACATELIHAYSLVHDDLPCMDNDV 105
           DAMRYA L+GGKRLRP LVL +++    ++A AL  A A E+IH YSL+HDDLP MDND 
Sbjct: 41  DAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAAIEMIHCYSLIHDDLPAMDNDD 100

Query: 106 LRRGKPTVHVKFGEADALLAGDALQALAFELLTPEDDEIPAATQALLCRLLARAAGSQGM 165
           LRRG+PTVH ++ E  A+LAGDAL   AFE++         A +  L   LA AAG++GM
Sbjct: 101 LRRGRPTVHRQYDEPTAILAGDALLTKAFEVIALPGTHSDPAVRCDLVTELAIAAGAKGM 160

Query: 166 AGGQAIDLAS----VGIALDETRLREMHRLKTGALLQGSVEMGAACGSVTPDALAALRDY 221
            GGQ IDL +    +  ALD   +  MH+LKTG L+  S   GA  G        AL +Y
Sbjct: 161 VGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISFSSIAGAILGKAPRSQRQALFNY 220

Query: 222 GAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGLDGARAQARQLLADAL 281
              +GLAFQ+ DD+LDV  D+ TLGKTAGKD A+ K T+VSLLGL+ AR QA  L   A+
Sbjct: 221 AHDLGLAFQIADDLLDVEGDTATLGKTAGKDEASGKSTFVSLLGLERARDQADMLAEQAV 280

Query: 282 AALEKSGLADTSALRALAHMVVDR 305
             L+         LRA+A  VVDR
Sbjct: 281 NHLDAFD-EKADLLRAVARFVVDR 303