Pairwise Alignments

Query, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

Subject, 302 a.a., geranylgeranyl pyrophosphate synthase from Dechlorosoma suillum PS

 Score =  270 bits (691), Expect = 2e-77
 Identities = 167/308 (54%), Positives = 195/308 (63%), Gaps = 15/308 (4%)

Query: 2   STATTAAPPRWDAKTLAAWCDPHLANVESALSRWVGV--DAPVLLGDAMRYAVLDGGKRL 59
           S A+    P W A+T A          E+AL R++      P  L DAMRY+ L GGKR+
Sbjct: 4   SDASALPFPDWMAQTQA--------RTEAALGRFLPAAETIPQGLHDAMRYSALGGGKRV 55

Query: 60  RPLLVLAASEAVGGNKAAALRAACATELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGE 119
           RPLL  AA E  G    A    ACA E+IH YSLVHDDLPCMD+DVLRRG+PT HV++ E
Sbjct: 56  RPLLAFAAGELCGATAEALDCVACAVEMIHVYSLVHDDLPCMDDDVLRRGRPTCHVQYDE 115

Query: 120 ADALLAGDALQALAFELLTPEDDEIPAATQAL-LCRLLARAAGSQGMAGGQAIDLASVGI 178
             ALL GDALQ+ AFE+L  +    P+  Q L L RLLA  +GS GMAGGQAIDLASVG 
Sbjct: 116 PTALLVGDALQSRAFEILAAQ--PWPSPAQGLELVRLLAHGSGSCGMAGGQAIDLASVGK 173

Query: 179 ALDETRLREMHRLKTGALLQGSVEMGAACGSVTPDA-LAALRDYGAAIGLAFQVVDDILD 237
           +LD+ +L  MH LKTGAL++ +V MGA CG+    A L  L  +    GL FQVVDDILD
Sbjct: 174 SLDQPQLELMHALKTGALIRAAVLMGAHCGTPLAAAELERLDAFAKRAGLLFQVVDDILD 233

Query: 238 VTADSQTLGKTAGKDAAADKPTYVSLLGLDGARAQARQLLADALAALEKSGLADTSALRA 297
            TA + TLGKTAGKD AADKPTYV LLGL+ AR  A  L  DAL ALE  G      L  
Sbjct: 234 CTASTATLGKTAGKDEAADKPTYVRLLGLETARQLADDLRRDALGALEGFG-PRARRLIE 292

Query: 298 LAHMVVDR 305
           LAH +  R
Sbjct: 293 LAHYITTR 300