Pairwise Alignments

Query, 310 a.a., putative membrane protein from Variovorax sp. SCN45

Subject, 295 a.a., Protein of unknown function DUF6 from Pseudomonas syringae pv. syringae B728a

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 37/303 (12%)

Query: 5   WMVLGAFLFATMSVVVKIASEWFNSGEMVLGRGLIGIVFL-WLLARNRGVS-LATRYPGM 62
           +++L  FLFA+   + K  S ++    +V  R L+  + +  +   + G+  L T+ PG+
Sbjct: 20  FILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGLRVLRTKRPGL 79

Query: 63  HAWRSTIGVISLGAWFYAIAHLPLATAVTLNYMSSVWVAAFLVGGALLAWVPVPGRDGRV 122
              R+   + +   +  ++  +P A A  +N+++ + V A          + VP    RV
Sbjct: 80  QVLRALALLGTSLLFTSSLMFIPQAEATAVNFLAPLLVTA----------LSVPLLHERV 129

Query: 123 ERPPLQGTLAMTVLAGFAGVVLMLKPTVSGNEGFGGMLGLLSGLTAAFAYMQVVA--LSR 180
            R        + V+ GF GV++++ P   G E F   + L       FA  Q++   +S 
Sbjct: 130 TRGQW-----IAVVVGFVGVMIIIHP---GGELFTPAILLPLSSALCFALYQLLTRLVSP 181

Query: 181 IGEPELRTVFYFAVGSAVAGAFATAATGFSGGASW---TWQHALWLLPIGLLAALGQLCM 237
              P     F        AG F T          W     +H  +LL +G       L +
Sbjct: 182 FDSPTTSNFF--------AGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLL 233

Query: 238 TRAYATAKTQAGTLVVANLQYSGIVFAAFYGVVLFNDRIDAAGWGGMALIIASGIAATVL 297
           T+A+  A       ++A   Y  IVFA   G ++F+         G+A+I  SG+AA   
Sbjct: 234 TQAFRFA----APAMLAPFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQ 289

Query: 298 RQR 300
           ++R
Sbjct: 290 QRR 292