Pairwise Alignments

Query, 248 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

Subject, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (347), Expect = 1e-37
 Identities = 82/194 (42%), Positives = 112/194 (57%), Gaps = 9/194 (4%)

Query: 40  ITAGESVFLHGPSGCGKSTLLSLLAGVLVADEGRVTLLGHDWSKLSGAQRDRSRVAHVGY 99
           I AGESV + G SG GKSTL++LLAG+    EG V LLG   S+L    R   R   VG+
Sbjct: 32  IQAGESVAIVGASGAGKSTLMTLLAGLDTPSEGEVYLLGKPLSQLDDEARAALRSESVGF 91

Query: 100 IFQQFNLLPYLSVIDNVLLPCRFSARRESQAARNGSARQEAEHLLAQMGLDRNLWKRQAL 159
           +FQ F L+P LS ++NV LPC      E         R+ A+ LL  +GL+  +    A 
Sbjct: 92  VFQSFLLIPSLSALENVTLPCLLKGEAED--------RERAQKLLKAVGLEHRMHHSPA- 142

Query: 160 QLSVGQQQRVAAARALIGQPEVVIADEPTSALDEDRREAFLDVLLTACAQNHSALVFVSH 219
           QLS G+QQRVA ARA +  P+V+ ADEPT  LD++     +D+L     ++ + LV V+H
Sbjct: 143 QLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKVIDLLFELNREHGTTLVLVTH 202

Query: 220 DQRIAQRFVRHVLL 233
           D ++AQR  R   +
Sbjct: 203 DPKLAQRCQRRFFM 216