Pairwise Alignments

Query, 248 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

Subject, 228 a.a., lipoprotein-releasing system ATP-binding protein LolD from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (287), Expect = 1e-30
 Identities = 67/195 (34%), Positives = 113/195 (57%), Gaps = 7/195 (3%)

Query: 37  AFRITAGESVFLHGPSGCGKSTLLSLLAGVLVADEGRVTLLGHDWSKLSGAQRDRSRVAH 96
           +F +  GE V + G SG GKSTLL +L  +  A EG+V  LG    +LS  ++ + R  H
Sbjct: 28  SFELKRGELVSIIGSSGSGKSTLLHILGALDDASEGQVEFLGQSLHQLSSNKQAKIRNQH 87

Query: 97  VGYIFQQFNLLPYLSVIDNVLLPCRFSARRESQAARNGSARQEAEHLLAQMGLDRNLWKR 156
           +G+++Q  +LL   S ++NV +P        ++      A+ +A+ LL ++GL   +  R
Sbjct: 88  LGFVYQFHHLLADFSALENVAMPLLIGGMNVAK------AKAKAQSLLERVGLGHRVAHR 141

Query: 157 QALQLSVGQQQRVAAARALIGQPEVVIADEPTSALDEDRREAFLDVLLTACAQNHSALVF 216
            + +LS G++QRVA ARAL+ +P++V+ADEPT  LD     +  D++     ++ +A + 
Sbjct: 142 PS-ELSGGERQRVAIARALVNKPDLVLADEPTGNLDHKTALSIYDLMRELNRESGTAFLV 200

Query: 217 VSHDQRIAQRFVRHV 231
           V+HD  +A +  RH+
Sbjct: 201 VTHDGELAAKMDRHM 215